Analysis of interatomic Contacts of Structural Units in PDB entry:
4OLE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4OLE entry

There are 4 chains in PDB entry 4OLE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 0	GLU 485
B	GLY 0	SER 483
C	GLY 0	PRO 482
D	GLY 0	PRO 482

There are 3 helices in PDB entry 4OLE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	424	428	Right-handed alpha
Helix 2	2	B	424	428	Right-handed alpha
Helix 3	3	D	424	428	Right-handed alpha

There are 13 sheets in PDB entry 4OLE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	365	366	first strand
Strand 2	B	466	478	anti-parallel
Strand 3	B	384	386	parallel

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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	365	366	first strand
Strand 2	B	466	478	anti-parallel
Strand 3	B	453	463	anti-parallel
Strand 4	B	410	417	anti-parallel

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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	374	378	first strand
Strand 2	A	391	399	anti-parallel
Strand 3	A	439	447	anti-parallel
Strand 4	A	420	421	anti-parallel

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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	374	378	first strand
Strand 2	A	391	399	anti-parallel
Strand 3	A	439	447	anti-parallel
Strand 4	A	429	430	anti-parallel

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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	384	386	first strand
Strand 2	A	466	478	parallel
Strand 3	A	453	463	anti-parallel
Strand 4	A	410	417	anti-parallel

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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	384	386	first strand
Strand 2	A	466	478	parallel
Strand 3	B	365	366	anti-parallel

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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	374	378	first strand
Strand 2	B	391	399	anti-parallel
Strand 3	B	439	447	anti-parallel
Strand 4	B	420	421	anti-parallel

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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	374	378	first strand
Strand 2	B	391	399	anti-parallel
Strand 3	B	439	447	anti-parallel
Strand 4	B	429	430	anti-parallel

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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	374	378	first strand
Strand 2	C	391	399	anti-parallel
Strand 3	C	439	447	anti-parallel
Strand 4	C	420	421	anti-parallel

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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	384	386	first strand
Strand 2	C	466	478	parallel
Strand 3	C	453	463	anti-parallel
Strand 4	C	410	417	anti-parallel

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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	374	378	first strand
Strand 2	D	391	399	anti-parallel
Strand 3	D	439	447	anti-parallel
Strand 4	D	420	421	anti-parallel

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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	374	378	first strand
Strand 2	D	391	399	anti-parallel
Strand 3	D	439	447	anti-parallel
Strand 4	D	429	430	anti-parallel

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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	384	386	first strand
Strand 2	D	466	478	parallel
Strand 3	D	453	463	anti-parallel
Strand 4	D	410	417	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4OLE

Analysis of interatomic Contacts of Structural Units in PDB entry:
4OLE