Analysis of interatomic Contacts of Structural Units in PDB entry:
4OMK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OMK entry

There are 2 chains in PDB entry 4OMK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 274
B
 MET 1VAL 274
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 4OMK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 24Right-handed alpha
Helix 2
2
A
26 30Right-handed 310
Helix 3
3
A
34 45Right-handed alpha
Helix 4
4
A
48 66Right-handed alpha
Helix 5
5
A
67 74Right-handed 310
Helix 6
6
A
77 84Right-handed alpha
Helix 7
7
A
107 115Right-handed alpha
Helix 8
8
A
116 143Right-handed alpha
Helix 9
9
A
159 163Right-handed 310
Helix 10
10
A
164 182Right-handed alpha
Helix 11
11
A
197 206Right-handed alpha
Helix 12
12
A
207 209Right-handed 310
Helix 13
13
A
210 216Right-handed alpha
Helix 14
14
A
223 232Right-handed alpha
Helix 15
15
A
233 237Right-handed 310
Helix 16
16
A
238 242Right-handed 310
Helix 17
17
A
265 269Right-handed 310
Helix 18
18
B
9 24Right-handed alpha
Helix 19
19
B
26 30Right-handed 310
Helix 20
20
B
34 45Right-handed alpha
Helix 21
21
B
48 66Right-handed alpha
Helix 22
22
B
67 74Right-handed 310
Helix 23
23
B
77 84Right-handed alpha
Helix 24
24
B
107 115Right-handed alpha
Helix 25
25
B
116 143Right-handed alpha
Helix 26
26
B
159 163Right-handed 310
Helix 27
27
B
164 182Right-handed alpha
Helix 28
28
B
197 206Right-handed alpha
Helix 29
29
B
207 209Right-handed 310
Helix 30
30
B
210 216Right-handed alpha
Helix 31
31
B
223 232Right-handed alpha
Helix 32
32
B
233 237Right-handed 310
Helix 33
33
B
238 242Right-handed 310
Helix 34
34
B
265 269Right-handed 310
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There are 2 sheets in PDB entry 4OMK. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 91first strand
Strand 2
A
97 102anti-parallel
Strand 3
A
149 154parallel
Strand 4
A
186 192parallel
Strand 5
A
217 219parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
87 91first strand
Strand 2
B
97 102anti-parallel
Strand 3
B
149 154parallel
Strand 4
B
186 192parallel
Strand 5
B
217 219parallel
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