Analysis of interatomic Contacts of Structural Units in PDB entry:
4ONZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ONZ entry

There is 1 chain in PDB entry 4ONZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 33THR 380
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 4 helices in PDB entry 4ONZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
132 137Right-handed alpha
Helix 2
2
A
188 193Right-handed alpha
Helix 3
3
A
331 335Right-handed 310
Helix 4
4
A
375 379Right-handed 310
Back to top of page

There are 6 sheets in PDB entry 4ONZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 59first strand
Strand 2
A
64 67anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 81first strand
Strand 2
A
84 92anti-parallel
Strand 3
A
104 111anti-parallel
Strand 4
A
118 119anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 148first strand
Strand 2
A
154 161anti-parallel
Strand 3
A
166 173anti-parallel
Strand 4
A
180 184anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 215first strand
Strand 2
A
202 209anti-parallel
Strand 3
A
274 277parallel
Strand 4
A
280 288anti-parallel
Strand 5
A
267 270anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 244first strand
Strand 2
A
232 236anti-parallel
Strand 3
A
222 226anti-parallel
Strand 4
A
202 209anti-parallel
Strand 5
A
274 277parallel
Strand 6
A
280 288anti-parallel
Strand 7
A
303 310anti-parallel
Strand 8
A
318 321anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
344 352first strand
Strand 2
A
355 362anti-parallel
Strand 3
A
366 372anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il