Analysis of interatomic Contacts of Structural Units in PDB entry:
4OOB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OOB entry

There is 1 chain in PDB entry 4OOB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3LEU 252
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 4OOB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 24Right-handed alpha
Helix 2
2
A
34 50Right-handed alpha
Helix 3
3
A
149 160Right-handed alpha
Helix 4
4
A
169 176Right-handed alpha
Helix 5
5
A
184 192Right-handed alpha
Helix 6
6
A
193 194Right-handed 310
Helix 7
7
A
195 200Right-handed 310
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There is 1 sheet ( A) in PDB entry 4OOB.

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 10first strand
Strand 2
A
78 91anti-parallel
Strand 3
A
94 105anti-parallel
Strand 4
A
108 120anti-parallel
Strand 5
A
61 69anti-parallel
Strand 6
A
204 210anti-parallel
Strand 7
A
243 251anti-parallel
Strand 8
A
230 236anti-parallel
Strand 9
A
218 226anti-parallel
Strand 10
A
144 148anti-parallel
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