Analysis of interatomic Contacts of Structural Units in PDB entry:
4OOG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OOG entry

There are 4 chains in PDB entry 4OOG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 43GLU 151
B
 SER 42GLU 151
C
 LYS 197ASP 457
D
 C 1 C 34
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 4OOG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
45 70Right-handed alpha
Helix 2
2
A
72 82Right-handed alpha
Helix 3
3
A
87 95Right-handed 310
Helix 4
4
A
96 111Right-handed alpha
Helix 5
5
A
115 127Right-handed alpha
Helix 6
6
A
139 150Right-handed alpha
Helix 7
7
B
45 70Right-handed alpha
Helix 8
8
B
72 82Right-handed alpha
Helix 9
9
B
87 89Right-handed 310
Helix 10
10
B
90 95Right-handed alpha
Helix 11
11
B
96 111Right-handed alpha
Helix 12
12
B
115 122Right-handed alpha
Helix 13
13
B
122 127Right-handed alpha
Helix 14
14
B
139 151Right-handed alpha
Helix 15
15
C
207 214Right-handed alpha
Helix 16
16
C
217 222Right-handed alpha
Helix 17
17
C
228 234Right-handed alpha
Helix 18
18
C
237 260Right-handed alpha
Helix 19
19
C
264 277Right-handed alpha
Helix 20
20
C
277 288Right-handed alpha
Helix 21
21
C
289 294Right-handed alpha
Helix 22
22
C
312 330Right-handed alpha
Helix 23
23
C
330 357Right-handed alpha
Helix 24
24
C
358 361Right-handed 310
Helix 25
25
C
369 378Right-handed alpha
Helix 26
26
C
380 384Right-handed 310
Helix 27
27
C
419 433Right-handed alpha
Helix 28
28
C
434 447Right-handed alpha
Helix 29
29
C
449 454Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4OOG.

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
386 391first strand
Strand 2
C
400 405anti-parallel
Strand 3
C
411 417anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il