Analysis of interatomic Contacts of Structural Units in PDB entry:
4OV4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OV4 entry

There is 1 chain in PDB entry 4OV4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PRO 3GLN 388
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 4OV4. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
14 19Right-handed alpha
Helix 2
2
A
25 40Right-handed alpha
Helix 3
3
A
52 66Right-handed alpha
Helix 4
4
A
79 91Right-handed alpha
Helix 5
5
A
105 112Right-handed alpha
Helix 6
6
A
116 136Right-handed alpha
Helix 7
7
A
147 151Right-handed 310
Helix 8
8
A
154 169Right-handed alpha
Helix 9
9
A
183 199Right-handed alpha
Helix 10
10
A
214 224Right-handed alpha
Helix 11
11
A
233 237Right-handed 310
Helix 12
12
A
245 256Right-handed alpha
Helix 13
13
A
263 265Right-handed 310
Helix 14
14
A
266 279Right-handed alpha
Helix 15
15
A
297 302Right-handed 310
Helix 16
16
A
311 316Right-handed alpha
Helix 17
17
A
321 325Right-handed 310
Helix 18
18
A
338 351Right-handed alpha
Helix 19
19
A
355 372Right-handed alpha
Helix 20
20
A
379 388Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4OV4.

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
7 10first strand
Strand 2
A
43 47parallel
Strand 3
A
71 77parallel
Strand 4
A
95 103parallel
Strand 5
A
140 146parallel
Strand 6
A
172 177parallel
Strand 7
A
203 208parallel
Strand 8
A
229 232parallel
Strand 9
A
7 10parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il