Analysis of interatomic Contacts of Structural Units in PDB entry:
4OV5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4OV5 entry

There are 18 chains in PDB entry 4OV5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 3	ALA 182
B	ASP 2	ALA 190
D	GLU 3	ASP 181
E	ASP 2	ALA 190
G	GLU 3	ASP 181
H	ASP 2	ALA 190
J	GLU 4	PHE 180
K	GLY 1	ALA 190
M	GLU 4	ALA 182
N	ASP 2	ALA 190
P	GLU 4	ALA 182
Q	ASP 2	ALA 190
C	GLY 2	ALA 15
F	GLY 2	ALA 15
I	SER 3	LEU 13
L	GLY 2	ALA 15
O	GLY 2	ALA 15
R	GLY 2	ALA 15

There are 38 helices in PDB entry 4OV5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	45	51	Right-handed 310
Helix 2	2	A	55	77	Right-handed alpha
Helix 3	3	B	51	53	Right-handed 310
Helix 4	4	B	54	62	Right-handed alpha
Helix 5	5	B	64	78	Right-handed alpha
Helix 6	6	B	78	87	Right-handed alpha
Helix 7	7	D	45	51	Right-handed 310
Helix 8	8	D	55	77	Right-handed alpha
Helix 9	9	E	51	53	Right-handed 310
Helix 10	10	E	54	63	Right-handed alpha
Helix 11	11	E	64	78	Right-handed alpha
Helix 12	12	E	78	87	Right-handed alpha
Helix 13	13	E	88	90	Right-handed 310
Helix 14	14	G	47	52	Right-handed alpha
Helix 15	15	G	55	77	Right-handed alpha
Helix 16	16	H	51	53	Right-handed 310
Helix 17	17	H	54	62	Right-handed alpha
Helix 18	18	H	64	78	Right-handed alpha
Helix 19	19	H	78	87	Right-handed alpha
Helix 20	20	J	45	51	Right-handed 310
Helix 21	21	J	55	77	Right-handed alpha
Helix 22	22	K	51	53	Right-handed 310
Helix 23	23	K	54	63	Right-handed alpha
Helix 24	24	K	64	78	Right-handed alpha
Helix 25	25	K	78	87	Right-handed alpha
Helix 26	26	M	45	50	Right-handed alpha
Helix 27	27	M	55	77	Right-handed alpha
Helix 28	28	N	51	53	Right-handed 310
Helix 29	29	N	54	64	Right-handed alpha
Helix 30	30	N	64	78	Right-handed alpha
Helix 31	31	N	78	87	Right-handed alpha
Helix 32	32	P	45	51	Right-handed 310
Helix 33	33	P	55	77	Right-handed alpha
Helix 34	34	Q	51	53	Right-handed 310
Helix 35	35	Q	54	62	Right-handed alpha
Helix 36	36	Q	64	78	Right-handed alpha
Helix 37	37	Q	78	87	Right-handed alpha
Helix 38	38	Q	88	90	Right-handed 310

There are 42 sheets in PDB entry 4OV5. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	40	43	first strand
Strand 2	A	29	35	anti-parallel
Strand 3	A	19	26	anti-parallel
Strand 4	A	5	15	anti-parallel
Strand 5	B	7	18	anti-parallel
Strand 6	B	23	32	anti-parallel
Strand 7	B	35	41	anti-parallel
Strand 8	B	47	49	anti-parallel

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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	88	93	first strand
Strand 2	A	103	112	anti-parallel
Strand 3	A	145	153	anti-parallel
Strand 4	A	133	134	anti-parallel

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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	88	93	first strand
Strand 2	A	103	112	anti-parallel
Strand 3	A	145	153	anti-parallel
Strand 4	A	138	139	anti-parallel

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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	128	first strand
Strand 2	A	118	123	anti-parallel
Strand 3	A	161	166	anti-parallel
Strand 4	A	174	178	anti-parallel

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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	103	first strand
Strand 2	B	113	122	anti-parallel
Strand 3	B	155	163	anti-parallel
Strand 4	B	142	144	anti-parallel

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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	103	first strand
Strand 2	B	113	122	anti-parallel
Strand 3	B	155	163	anti-parallel
Strand 4	B	148	149	anti-parallel

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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	136	138	first strand
Strand 2	B	128	133	anti-parallel
Strand 3	B	170	176	anti-parallel
Strand 4	B	184	189	anti-parallel

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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	40	43	first strand
Strand 2	D	29	35	anti-parallel
Strand 3	D	19	26	anti-parallel
Strand 4	D	5	15	anti-parallel
Strand 5	E	7	18	anti-parallel
Strand 6	E	23	32	anti-parallel
Strand 7	E	35	41	anti-parallel
Strand 8	E	47	49	anti-parallel

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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	88	93	first strand
Strand 2	D	103	112	anti-parallel
Strand 3	D	145	153	anti-parallel
Strand 4	D	133	134	anti-parallel

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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	88	93	first strand
Strand 2	D	103	112	anti-parallel
Strand 3	D	145	153	anti-parallel
Strand 4	D	138	139	anti-parallel

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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	126	128	first strand
Strand 2	D	118	123	anti-parallel
Strand 3	D	161	166	anti-parallel
Strand 4	D	174	178	anti-parallel

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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	98	103	first strand
Strand 2	E	113	122	anti-parallel
Strand 3	E	155	163	anti-parallel
Strand 4	E	142	144	anti-parallel

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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	98	103	first strand
Strand 2	E	113	122	anti-parallel
Strand 3	E	155	163	anti-parallel
Strand 4	E	148	149	anti-parallel

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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	136	138	first strand
Strand 2	E	128	133	anti-parallel
Strand 3	E	170	176	anti-parallel
Strand 4	E	184	189	anti-parallel

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There are 8 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	40	43	first strand
Strand 2	G	29	35	anti-parallel
Strand 3	G	19	26	anti-parallel
Strand 4	G	4	15	anti-parallel
Strand 5	H	7	18	anti-parallel
Strand 6	H	23	32	anti-parallel
Strand 7	H	35	41	anti-parallel
Strand 8	H	47	49	anti-parallel

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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	88	93	first strand
Strand 2	G	103	112	anti-parallel
Strand 3	G	145	153	anti-parallel
Strand 4	G	133	134	anti-parallel

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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	88	93	first strand
Strand 2	G	103	112	anti-parallel
Strand 3	G	145	153	anti-parallel
Strand 4	G	138	139	anti-parallel

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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	126	127	first strand
Strand 2	G	118	123	anti-parallel
Strand 3	G	161	166	anti-parallel
Strand 4	G	174	178	anti-parallel

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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	98	103	first strand
Strand 2	H	113	122	anti-parallel
Strand 3	H	155	163	anti-parallel
Strand 4	H	142	144	anti-parallel

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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	98	103	first strand
Strand 2	H	113	122	anti-parallel
Strand 3	H	155	163	anti-parallel
Strand 4	H	148	149	anti-parallel

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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	136	138	first strand
Strand 2	H	128	133	anti-parallel
Strand 3	H	170	176	anti-parallel
Strand 4	H	184	189	anti-parallel

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There are 8 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	40	43	first strand
Strand 2	J	29	35	anti-parallel
Strand 3	J	19	26	anti-parallel
Strand 4	J	5	15	anti-parallel
Strand 5	K	7	18	anti-parallel
Strand 6	K	23	32	anti-parallel
Strand 7	K	35	41	anti-parallel
Strand 8	K	47	49	anti-parallel

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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	88	93	first strand
Strand 2	J	103	112	anti-parallel
Strand 3	J	145	153	anti-parallel
Strand 4	J	133	134	anti-parallel

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There are 4 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	88	93	first strand
Strand 2	J	103	112	anti-parallel
Strand 3	J	145	153	anti-parallel
Strand 4	J	138	139	anti-parallel

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There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	126	128	first strand
Strand 2	J	118	123	anti-parallel
Strand 3	J	160	166	anti-parallel
Strand 4	J	174	179	anti-parallel

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There are 4 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	98	103	first strand
Strand 2	K	113	122	anti-parallel
Strand 3	K	155	163	anti-parallel
Strand 4	K	142	144	anti-parallel

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There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	98	103	first strand
Strand 2	K	113	122	anti-parallel
Strand 3	K	155	163	anti-parallel
Strand 4	K	148	149	anti-parallel

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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	136	137	first strand
Strand 2	K	128	133	anti-parallel
Strand 3	K	170	176	anti-parallel
Strand 4	K	184	189	anti-parallel

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There are 8 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	40	43	first strand
Strand 2	M	29	35	anti-parallel
Strand 3	M	19	26	anti-parallel
Strand 4	M	5	15	anti-parallel
Strand 5	N	7	18	anti-parallel
Strand 6	N	23	32	anti-parallel
Strand 7	N	35	41	anti-parallel
Strand 8	N	47	49	anti-parallel

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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	88	93	first strand
Strand 2	M	103	112	anti-parallel
Strand 3	M	145	153	anti-parallel
Strand 4	M	133	134	anti-parallel

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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	88	93	first strand
Strand 2	M	103	112	anti-parallel
Strand 3	M	145	153	anti-parallel
Strand 4	M	138	139	anti-parallel

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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	126	128	first strand
Strand 2	M	118	123	anti-parallel
Strand 3	M	161	166	anti-parallel
Strand 4	M	174	178	anti-parallel

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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	98	103	first strand
Strand 2	N	113	122	anti-parallel
Strand 3	N	155	163	anti-parallel
Strand 4	N	142	144	anti-parallel

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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	98	103	first strand
Strand 2	N	113	122	anti-parallel
Strand 3	N	155	163	anti-parallel
Strand 4	N	148	149	anti-parallel

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There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	136	137	first strand
Strand 2	N	128	133	anti-parallel
Strand 3	N	170	176	anti-parallel
Strand 4	N	184	189	anti-parallel

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There are 8 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	40	43	first strand
Strand 2	P	29	35	anti-parallel
Strand 3	P	19	26	anti-parallel
Strand 4	P	5	15	anti-parallel
Strand 5	Q	7	18	anti-parallel
Strand 6	Q	23	32	anti-parallel
Strand 7	Q	35	41	anti-parallel
Strand 8	Q	47	49	anti-parallel

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There are 4 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	88	93	first strand
Strand 2	P	103	112	anti-parallel
Strand 3	P	145	153	anti-parallel
Strand 4	P	133	134	anti-parallel

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There are 4 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	88	93	first strand
Strand 2	P	103	112	anti-parallel
Strand 3	P	145	153	anti-parallel
Strand 4	P	138	139	anti-parallel

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There are 4 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	126	128	first strand
Strand 2	P	118	123	anti-parallel
Strand 3	P	160	166	anti-parallel
Strand 4	P	174	179	anti-parallel

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There are 4 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	98	103	first strand
Strand 2	Q	113	122	anti-parallel
Strand 3	Q	155	163	anti-parallel
Strand 4	Q	142	144	anti-parallel

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There are 4 strands in AO sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	98	103	first strand
Strand 2	Q	113	122	anti-parallel
Strand 3	Q	155	163	anti-parallel
Strand 4	Q	148	149	anti-parallel

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There are 4 strands in AP sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	136	138	first strand
Strand 2	Q	128	133	anti-parallel
Strand 3	Q	170	176	anti-parallel
Strand 4	Q	184	189	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4OV5

Analysis of interatomic Contacts of Structural Units in PDB entry:
4OV5