Analysis of interatomic Contacts of Structural Units in PDB entry:
4OVJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OVJ entry

There is 1 chain in PDB entry 4OVJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 43ASN 438
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 4OVJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
57 75Right-handed alpha
Helix 2
AA2
A
87 101Right-handed alpha
Helix 3
AA3
A
114 122Right-handed alpha
Helix 4
AA4
A
139 145Right-handed alpha
Helix 5
AA5
A
168 173Right-handed alpha
Helix 6
AA6
A
182 198Right-handed alpha
Helix 7
AA7
A
207 218Right-handed alpha
Helix 8
AA8
A
233 250Right-handed alpha
Helix 9
AA9
A
255 260Right-handed alpha
Helix 10
AB1
A
285 293Right-handed alpha
Helix 11
AB2
A
329 343Right-handed alpha
Helix 12
AB3
A
343 351Right-handed alpha
Helix 13
AB4
A
359 369Right-handed alpha
Helix 14
AB5
A
372 389Right-handed alpha
Helix 15
AB6
A
399 416Right-handed alpha
Helix 16
AB7
A
420 438Right-handed alpha
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There are 5 sheets in PDB entry 4OVJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 84first strand
Strand 2
A
48 54parallel
Strand 3
A
107 110parallel
Strand 4
A
320 323anti-parallel
Strand 5
A
155 156anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 148first strand
Strand 2
A
151 152anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
316 317first strand
Strand 2
A
158 160anti-parallel
Strand 3
A
356 357anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
279 283first strand
Strand 2
A
162 167anti-parallel
Strand 3
A
298 301anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
221 223first strand
Strand 2
A
230 231anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il