Analysis of interatomic Contacts of Structural Units in PDB entry:
4OVM

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4OVM entry

There are 10 chains in PDB entry 4OVM (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 16	LEU 143
B	ASP 17	ARG 142
C	ASP 15	LEU 143
D	VAL 18	ARG 142
E	VAL 18	LEU 143
F	ASP 15	LEU 143
G	VAL 18	LEU 143
H	VAL 18	LEU 143
I	VAL 18	LEU 143
J	THR 19	ARG 142

There are 36 helices in PDB entry 4OVM. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	17	34	Right-handed alpha
Helix 2	AA2	A	36	42	Right-handed alpha
Helix 3	AA3	A	60	73	Right-handed alpha
Helix 4	AA4	A	113	115	Right-handed 310
Helix 5	AA5	B	18	34	Right-handed alpha
Helix 6	AA6	B	36	42	Right-handed alpha
Helix 7	AA7	B	60	73	Right-handed alpha
Helix 8	AA8	B	113	115	Right-handed 310
Helix 9	AA9	C	16	34	Right-handed alpha
Helix 10	AB1	C	36	42	Right-handed alpha
Helix 11	AB2	C	60	72	Right-handed alpha
Helix 12	AB3	D	22	34	Right-handed alpha
Helix 13	AB4	D	36	42	Right-handed alpha
Helix 14	AB5	D	60	74	Right-handed alpha
Helix 15	AB6	E	19	34	Right-handed alpha
Helix 16	AB7	E	36	41	Right-handed alpha
Helix 17	AB8	E	60	74	Right-handed alpha
Helix 18	AB9	E	113	115	Right-handed 310
Helix 19	AC1	F	16	34	Right-handed alpha
Helix 20	AC2	F	36	42	Right-handed alpha
Helix 21	AC3	F	60	73	Right-handed alpha
Helix 22	AC4	G	19	34	Right-handed alpha
Helix 23	AC5	G	36	42	Right-handed alpha
Helix 24	AC6	G	60	74	Right-handed alpha
Helix 25	AC7	G	113	116	Right-handed 310
Helix 26	AC8	H	19	34	Right-handed alpha
Helix 27	AC9	H	36	42	Right-handed alpha
Helix 28	AD1	H	60	73	Right-handed alpha
Helix 29	AD2	I	22	34	Right-handed alpha
Helix 30	AD3	I	36	42	Right-handed alpha
Helix 31	AD4	I	60	74	Right-handed alpha
Helix 32	AD5	I	113	115	Right-handed 310
Helix 33	AD6	J	22	34	Right-handed alpha
Helix 34	AD7	J	36	42	Right-handed alpha
Helix 35	AD8	J	60	73	Right-handed alpha
Helix 36	AD9	J	113	115	Right-handed 310

There are 10 sheets in PDB entry 4OVM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	56	59	first strand
Strand 2	A	44	52	anti-parallel
Strand 3	A	130	140	parallel
Strand 4	A	117	127	anti-parallel
Strand 5	A	95	105	anti-parallel
Strand 6	A	80	90	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	56	59	first strand
Strand 2	B	44	52	anti-parallel
Strand 3	B	130	140	parallel
Strand 4	B	117	127	anti-parallel
Strand 5	B	95	105	anti-parallel
Strand 6	B	80	90	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	56	59	first strand
Strand 2	C	44	52	anti-parallel
Strand 3	C	130	140	parallel
Strand 4	C	117	127	anti-parallel
Strand 5	C	95	105	anti-parallel
Strand 6	C	80	92	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	56	59	first strand
Strand 2	D	44	52	anti-parallel
Strand 3	D	130	140	parallel
Strand 4	D	118	127	anti-parallel
Strand 5	D	95	105	anti-parallel
Strand 6	D	80	92	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	56	59	first strand
Strand 2	E	44	52	anti-parallel
Strand 3	E	130	140	parallel
Strand 4	E	117	127	anti-parallel
Strand 5	E	95	105	anti-parallel
Strand 6	E	80	92	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	56	59	first strand
Strand 2	F	44	52	anti-parallel
Strand 3	F	130	140	parallel
Strand 4	F	117	127	anti-parallel
Strand 5	F	95	105	anti-parallel
Strand 6	F	80	90	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	56	59	first strand
Strand 2	G	44	52	anti-parallel
Strand 3	G	132	140	parallel
Strand 4	G	118	125	anti-parallel
Strand 5	G	95	105	anti-parallel
Strand 6	G	80	90	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	56	59	first strand
Strand 2	H	44	52	anti-parallel
Strand 3	H	130	140	parallel
Strand 4	H	117	127	anti-parallel
Strand 5	H	95	105	anti-parallel
Strand 6	H	80	92	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	56	59	first strand
Strand 2	I	44	52	anti-parallel
Strand 3	I	133	140	parallel
Strand 4	I	117	124	anti-parallel
Strand 5	I	95	105	anti-parallel
Strand 6	I	80	92	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	56	59	first strand
Strand 2	J	44	52	anti-parallel
Strand 3	J	130	140	parallel
Strand 4	J	117	127	anti-parallel
Strand 5	J	95	105	anti-parallel
Strand 6	J	80	89	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4OVM

Analysis of interatomic Contacts of Structural Units in PDB entry:
4OVM