Analysis of interatomic Contacts of Structural Units in PDB entry:
4OVQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OVQ entry

There is 1 chain in PDB entry 4OVQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 25GLU 326
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 4OVQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 54Right-handed alpha
Helix 2
AA2
A
70 80Right-handed alpha
Helix 3
AA3
A
90 94Right-handed alpha
Helix 4
AA4
A
99 105Right-handed 310
Helix 5
AA5
A
111 120Right-handed alpha
Helix 6
AA6
A
121 134Right-handed alpha
Helix 7
AA7
A
158 163Right-handed 310
Helix 8
AA8
A
172 182Right-handed alpha
Helix 9
AA9
A
190 192Right-handed 310
Helix 10
AB1
A
193 200Right-handed alpha
Helix 11
AB2
A
209 216Right-handed alpha
Helix 12
AB3
A
217 222Right-handed alpha
Helix 13
AB4
A
241 246Right-handed alpha
Helix 14
AB5
A
248 284Right-handed alpha
Helix 15
AB6
A
294 300Right-handed alpha
Helix 16
AB7
A
301 312Right-handed alpha
Helix 17
AB8
A
315 324Right-handed alpha
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There are 3 sheets in PDB entry 4OVQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 63first strand
Strand 2
A
26 30parallel
Strand 3
A
85 89parallel
Strand 4
A
235 240anti-parallel
Strand 5
A
136 142anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 208first strand
Strand 2
A
147 151anti-parallel
Strand 3
A
224 231anti-parallel
Strand 4
A
287 290parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 169first strand
Strand 2
A
185 188parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il