Analysis of interatomic Contacts of Structural Units in PDB entry:
4OVS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OVS entry

There are 2 chains in PDB entry 4OVS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 21LYS 330
B
 MSE 21LYS 330
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 4OVS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 53Right-handed alpha
Helix 2
AA2
A
72 79Right-handed alpha
Helix 3
AA3
A
88 93Right-handed 310
Helix 4
AA4
A
96 104Right-handed 310
Helix 5
AA5
A
110 119Right-handed alpha
Helix 6
AA6
A
120 133Right-handed alpha
Helix 7
AA7
A
157 162Right-handed alpha
Helix 8
AA8
A
171 180Right-handed alpha
Helix 9
AA9
A
189 191Right-handed 310
Helix 10
AB1
A
192 199Right-handed alpha
Helix 11
AB2
A
208 215Right-handed alpha
Helix 12
AB3
A
216 221Right-handed 310
Helix 13
AB4
A
240 246Right-handed alpha
Helix 14
AB5
A
250 288Right-handed alpha
Helix 15
AB6
A
296 309Right-handed alpha
Helix 16
AB7
A
310 315Right-handed 310
Helix 17
AB8
A
319 329Right-handed alpha
Helix 18
AB9
B
36 53Right-handed alpha
Helix 19
AC1
B
72 79Right-handed alpha
Helix 20
AC2
B
88 93Right-handed 310
Helix 21
AC3
B
96 104Right-handed 310
Helix 22
AC4
B
110 119Right-handed alpha
Helix 23
AC5
B
120 133Right-handed alpha
Helix 24
AC6
B
157 162Right-handed alpha
Helix 25
AC7
B
171 180Right-handed alpha
Helix 26
AC8
B
189 191Right-handed 310
Helix 27
AC9
B
192 199Right-handed alpha
Helix 28
AD1
B
208 215Right-handed alpha
Helix 29
AD2
B
216 221Right-handed 310
Helix 30
AD3
B
240 246Right-handed alpha
Helix 31
AD4
B
250 288Right-handed alpha
Helix 32
AD5
B
296 309Right-handed alpha
Helix 33
AD6
B
310 313Right-handed 310
Helix 34
AD7
B
314 319Right-handed alpha
Helix 35
AD8
B
319 329Right-handed alpha
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There are 6 sheets in PDB entry 4OVS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 62first strand
Strand 2
A
24 29parallel
Strand 3
A
84 85parallel
Strand 4
A
231 239anti-parallel
Strand 5
A
135 145anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 207first strand
Strand 2
A
147 150anti-parallel
Strand 3
A
223 225anti-parallel
Strand 4
A
291 293parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 168first strand
Strand 2
A
184 187parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 62first strand
Strand 2
B
24 29parallel
Strand 3
B
84 85parallel
Strand 4
B
231 239anti-parallel
Strand 5
B
135 145anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
204 207first strand
Strand 2
B
147 150anti-parallel
Strand 3
B
223 225anti-parallel
Strand 4
B
291 293parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
165 168first strand
Strand 2
B
184 187parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il