Analysis of interatomic Contacts of Structural Units in PDB entry:
4OVT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OVT entry

There are 2 chains in PDB entry 4OVT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 24ASN 324
B
 ALA 24ASN 324
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 4OVT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 55Right-handed alpha
Helix 2
AA2
A
71 81Right-handed alpha
Helix 3
AA3
A
90 95Right-handed alpha
Helix 4
AA4
A
96 97Right-handed 310
Helix 5
AA5
A
98 106Right-handed 310
Helix 6
AA6
A
112 121Right-handed alpha
Helix 7
AA7
A
122 135Right-handed alpha
Helix 8
AA8
A
159 164Right-handed 310
Helix 9
AA9
A
173 184Right-handed alpha
Helix 10
AB1
A
191 193Right-handed 310
Helix 11
AB2
A
194 201Right-handed alpha
Helix 12
AB3
A
211 217Right-handed alpha
Helix 13
AB4
A
218 222Right-handed 310
Helix 14
AB5
A
242 246Right-handed alpha
Helix 15
AB6
A
249 274Right-handed alpha
Helix 16
AB7
A
274 285Right-handed alpha
Helix 17
AB8
A
294 302Right-handed alpha
Helix 18
AB9
A
303 307Right-handed 310
Helix 19
AC1
A
314 324Right-handed alpha
Helix 20
AC2
B
38 55Right-handed alpha
Helix 21
AC3
B
71 81Right-handed alpha
Helix 22
AC4
B
90 95Right-handed alpha
Helix 23
AC5
B
96 97Right-handed 310
Helix 24
AC6
B
98 106Right-handed 310
Helix 25
AC7
B
112 121Right-handed alpha
Helix 26
AC8
B
122 135Right-handed alpha
Helix 27
AC9
B
159 164Right-handed alpha
Helix 28
AD1
B
173 184Right-handed alpha
Helix 29
AD2
B
191 193Right-handed 310
Helix 30
AD3
B
194 201Right-handed alpha
Helix 31
AD4
B
211 217Right-handed alpha
Helix 32
AD5
B
218 222Right-handed 310
Helix 33
AD6
B
242 246Right-handed alpha
Helix 34
AD7
B
249 285Right-handed alpha
Helix 35
AD8
B
294 302Right-handed alpha
Helix 36
AD9
B
303 307Right-handed 310
Helix 37
AE1
B
314 324Right-handed alpha
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There are 4 sheets in PDB entry 4OVT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 64first strand
Strand 2
A
26 31parallel
Strand 3
A
85 89parallel
Strand 4
A
225 241anti-parallel
Strand 5
A
137 153anti-parallel
Strand 6
A
206 210anti-parallel
Strand 7
A
167 170parallel
Strand 8
A
186 189parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 64first strand
Strand 2
A
26 31parallel
Strand 3
A
85 89parallel
Strand 4
A
225 241anti-parallel
Strand 5
A
288 290parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 64first strand
Strand 2
B
26 31parallel
Strand 3
B
85 89parallel
Strand 4
B
225 241anti-parallel
Strand 5
B
137 153anti-parallel
Strand 6
B
206 210anti-parallel
Strand 7
B
167 170parallel
Strand 8
B
186 189parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 64first strand
Strand 2
B
26 31parallel
Strand 3
B
85 89parallel
Strand 4
B
225 241anti-parallel
Strand 5
B
288 290parallel
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