Analysis of interatomic Contacts of Structural Units in PDB entry:
4OVZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OVZ entry

There are 5 chains in PDB entry 4OVZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 9ASN 111
A
 TYR 113GLN 270
A
 GLY 272THR 313
B
 LEU 65ASN 111
B
 TYR 113LYS 316
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 17 helices in PDB entry 4OVZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 33Right-handed alpha
Helix 2
AA2
A
62 74Right-handed alpha
Helix 3
AA3
A
79 92Right-handed alpha
Helix 4
AA4
A
111 122Right-handed alpha
Helix 5
AA5
A
130 142Right-handed alpha
Helix 6
AA6
A
145 156Right-handed alpha
Helix 7
AA7
A
165 175Right-handed alpha
Helix 8
AA8
A
202 206Right-handed alpha
Helix 9
AA9
A
213 220Right-handed alpha
Helix 10
AB1
B
66 74Right-handed alpha
Helix 11
AB2
B
79 92Right-handed alpha
Helix 12
AB3
B
111 122Right-handed alpha
Helix 13
AB4
B
130 142Right-handed alpha
Helix 14
AB5
B
145 156Right-handed alpha
Helix 15
AB6
B
165 175Right-handed alpha
Helix 16
AB7
B
202 206Right-handed alpha
Helix 17
AB8
B
213 220Right-handed alpha
Back to top of page

There are 9 sheets in PDB entry 4OVZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 11first strand
Strand 2
A
56 57parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 99first strand
Strand 2
A
102 103anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 200first strand
Strand 2
A
183 189anti-parallel
Strand 3
A
231 239anti-parallel
Strand 4
A
221 223anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 200first strand
Strand 2
A
183 189anti-parallel
Strand 3
A
231 239anti-parallel
Strand 4
A
310 312anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 209first strand
Strand 2
A
242 255parallel
Strand 3
A
296 307anti-parallel
Strand 4
A
261 267anti-parallel
Strand 5
A
272 279anti-parallel
Strand 6
A
283 287anti-parallel
Strand 7
A
290 294anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
98 99first strand
Strand 2
B
102 103anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
197 200first strand
Strand 2
B
183 189anti-parallel
Strand 3
B
232 239anti-parallel
Strand 4
B
221 222anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
197 200first strand
Strand 2
B
183 189anti-parallel
Strand 3
B
232 239anti-parallel
Strand 4
B
310 312anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
207 209first strand
Strand 2
B
242 255parallel
Strand 3
B
296 307anti-parallel
Strand 4
B
261 267anti-parallel
Strand 5
B
272 279anti-parallel
Strand 6
B
283 287anti-parallel
Strand 7
B
290 294anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il