Analysis of interatomic Contacts of Structural Units in PDB entry:
4OW6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4OW6 entry

There are 2 chains in PDB entry 4OW6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 1	SER 535
B	GLY 1	SER 535

There are 39 helices in PDB entry 4OW6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	1	5	Right-handed alpha
Helix 2	AA2	A	30	34	Right-handed 310
Helix 3	AA3	A	47	51	Right-handed 310
Helix 4	AA4	A	58	64	Right-handed alpha
Helix 5	AA5	A	98	106	Right-handed alpha
Helix 6	AA6	A	113	119	Right-handed alpha
Helix 7	AA7	A	120	128	Right-handed alpha
Helix 8	AA8	A	154	159	Right-handed 310
Helix 9	AA9	A	175	183	Right-handed alpha
Helix 10	AB1	A	184	186	Right-handed 310
Helix 11	AB2	A	206	215	Right-handed alpha
Helix 12	AB3	A	278	289	Right-handed alpha
Helix 13	AB4	A	290	295	Right-handed alpha
Helix 14	AB5	A	296	306	Right-handed alpha
Helix 15	AB6	A	309	313	Right-handed 310
Helix 16	AB7	A	325	342	Right-handed alpha
Helix 17	AB8	A	343	347	Right-handed 310
Helix 18	AB9	A	358	376	Right-handed alpha
Helix 19	AC1	A	400	405	Right-handed 310
Helix 20	AC2	B	1	5	Right-handed 310
Helix 21	AC3	B	7	11	Right-handed 310
Helix 22	AC4	B	30	34	Right-handed 310
Helix 23	AC5	B	47	51	Right-handed 310
Helix 24	AC6	B	58	64	Right-handed alpha
Helix 25	AC7	B	98	106	Right-handed alpha
Helix 26	AC8	B	113	118	Right-handed alpha
Helix 27	AC9	B	120	128	Right-handed alpha
Helix 28	AD1	B	154	159	Right-handed 310
Helix 29	AD2	B	175	183	Right-handed alpha
Helix 30	AD3	B	184	186	Right-handed 310
Helix 31	AD4	B	206	218	Right-handed alpha
Helix 32	AD5	B	276	289	Right-handed alpha
Helix 33	AD6	B	290	295	Right-handed alpha
Helix 34	AD7	B	296	306	Right-handed alpha
Helix 35	AD8	B	309	313	Right-handed 310
Helix 36	AD9	B	325	342	Right-handed alpha
Helix 37	AE1	B	343	348	Right-handed alpha
Helix 38	AE2	B	358	376	Right-handed alpha
Helix 39	AE3	B	400	403	Right-handed 310

There are 12 sheets in PDB entry 4OW6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	6	15	first strand
Strand 2	A	88	94	anti-parallel
Strand 3	A	134	139	parallel
Strand 4	A	147	151	anti-parallel
Strand 5	A	53	56	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	18	23	first strand
Strand 2	A	79	84	anti-parallel
Strand 3	A	160	166	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	316	317	first strand
Strand 2	A	320	321	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	394	398	first strand
Strand 2	A	413	422	anti-parallel
Strand 3	A	485	492	anti-parallel
Strand 4	A	442	443	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	394	398	first strand
Strand 2	A	413	422	anti-parallel
Strand 3	A	485	492	anti-parallel
Strand 4	A	449	452	anti-parallel
Strand 5	A	455	462	anti-parallel
Strand 6	A	468	473	anti-parallel
Strand 7	A	431	435	anti-parallel
Strand 8	A	508	518	anti-parallel
Strand 9	A	521	530	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	427	428	first strand
Strand 2	A	478	479	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	12	15	first strand
Strand 2	B	88	93	anti-parallel
Strand 3	B	134	139	parallel
Strand 4	B	147	151	anti-parallel
Strand 5	B	53	56	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	18	23	first strand
Strand 2	B	79	84	anti-parallel
Strand 3	B	160	166	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	394	398	first strand
Strand 2	B	412	422	anti-parallel
Strand 3	B	485	493	anti-parallel
Strand 4	B	442	443	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	394	398	first strand
Strand 2	B	412	422	anti-parallel
Strand 3	B	485	493	anti-parallel
Strand 4	B	449	452	anti-parallel
Strand 5	B	455	463	anti-parallel
Strand 6	B	468	473	anti-parallel
Strand 7	B	431	435	anti-parallel
Strand 8	B	508	518	anti-parallel
Strand 9	B	521	530	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	405	407	first strand
Strand 2	B	532	534	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	427	428	first strand
Strand 2	B	478	479	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4OW6

Analysis of interatomic Contacts of Structural Units in PDB entry:
4OW6