Analysis of interatomic Contacts of Structural Units in PDB entry:
4OZU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OZU entry

There is 1 chain in PDB entry 4OZU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3PRO 392
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 4OZU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
319 323Right-handed 310
Helix 2
AA2
A
324 327Right-handed 310
Helix 3
AA3
A
358 362Right-handed 310
Helix 4
AA4
A
373 379Right-handed alpha
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There are 9 sheets in PDB entry 4OZU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 17first strand
Strand 2
A
341 348anti-parallel
Strand 3
A
329 337anti-parallel
Strand 4
A
315 317anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 23first strand
Strand 2
A
65 66parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 39first strand
Strand 2
A
43 47anti-parallel
Strand 3
A
56 60anti-parallel
Strand 4
A
71 73anti-parallel
Strand 5
A
116 117parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 85first strand
Strand 2
A
92 97anti-parallel
Strand 3
A
102 106anti-parallel
Strand 4
A
122 124anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 136first strand
Strand 2
A
143 148anti-parallel
Strand 3
A
152 157anti-parallel
Strand 4
A
162 168anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 178first strand
Strand 2
A
185 189anti-parallel
Strand 3
A
193 198anti-parallel
Strand 4
A
203 209anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 221first strand
Strand 2
A
231 237anti-parallel
Strand 3
A
243 249anti-parallel
Strand 4
A
258 263anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 273first strand
Strand 2
A
279 284anti-parallel
Strand 3
A
289 296anti-parallel
Strand 4
A
299 307anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 366first strand
Strand 2
A
387 388anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il