Analysis of interatomic Contacts of Structural Units in PDB entry:
4P0S

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4P0S entry

There are 20 chains in PDB entry 4P0S (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 256	THR 551
B	ASN 233	LEU 566
C	GLN 256	THR 551
D	ASN 233	LEU 566
E	GLN 256	THR 551
F	ASN 233	LEU 566
G	GLN 256	THR 551
H	ASN 233	LEU 566
I	G 1	T 12
J	A 23	G 45
L	T 47	T 55
M	G 1	T 12
N	A 23	G 45
P	T 47	T 55
Q	G 1	T 12
R	A 23	G 45
T	T 47	T 55
U	G 1	T 12
V	A 23	G 45
X	T 47	T 55

There are 93 helices in PDB entry 4P0S. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	286	294	Right-handed alpha
Helix 2	AA2	A	336	346	Right-handed alpha
Helix 3	AA3	A	347	358	Right-handed alpha
Helix 4	AA4	A	380	394	Right-handed alpha
Helix 5	AA5	A	404	423	Right-handed alpha
Helix 6	AA6	A	456	463	Right-handed alpha
Helix 7	AA7	A	473	480	Right-handed alpha
Helix 8	AA8	A	486	497	Right-handed alpha
Helix 9	AA9	A	499	510	Right-handed alpha
Helix 10	AB1	A	512	518	Right-handed alpha
Helix 11	AB2	A	534	546	Right-handed alpha
Helix 12	AB3	B	238	242	Right-handed 310
Helix 13	AB4	B	247	250	Right-handed 310
Helix 14	AB5	B	257	262	Right-handed alpha
Helix 15	AB6	B	265	275	Right-handed alpha
Helix 16	AB7	B	318	329	Right-handed alpha
Helix 17	AB8	B	343	355	Right-handed alpha
Helix 18	AB9	B	404	419	Right-handed alpha
Helix 19	AC1	B	428	456	Right-handed alpha
Helix 20	AC2	B	457	462	Right-handed 310
Helix 21	AC3	B	477	488	Right-handed alpha
Helix 22	AC4	B	493	504	Right-handed alpha
Helix 23	AC5	B	506	516	Right-handed alpha
Helix 24	AC6	B	546	559	Right-handed alpha
Helix 25	AC7	C	286	294	Right-handed alpha
Helix 26	AC8	C	336	346	Right-handed alpha
Helix 27	AC9	C	347	358	Right-handed alpha
Helix 28	AD1	C	380	394	Right-handed alpha
Helix 29	AD2	C	404	423	Right-handed alpha
Helix 30	AD3	C	456	462	Right-handed alpha
Helix 31	AD4	C	473	480	Right-handed alpha
Helix 32	AD5	C	486	497	Right-handed alpha
Helix 33	AD6	C	499	510	Right-handed alpha
Helix 34	AD7	C	512	518	Right-handed alpha
Helix 35	AD8	C	535	545	Right-handed alpha
Helix 36	AD9	D	247	250	Right-handed 310
Helix 37	AE1	D	257	262	Right-handed alpha
Helix 38	AE2	D	265	275	Right-handed alpha
Helix 39	AE3	D	318	329	Right-handed alpha
Helix 40	AE4	D	343	355	Right-handed alpha
Helix 41	AE5	D	404	419	Right-handed alpha
Helix 42	AE6	D	428	456	Right-handed alpha
Helix 43	AE7	D	457	461	Right-handed 310
Helix 44	AE8	D	477	488	Right-handed alpha
Helix 45	AE9	D	493	504	Right-handed alpha
Helix 46	AF1	D	506	516	Right-handed alpha
Helix 47	AF2	D	546	559	Right-handed alpha
Helix 48	AF3	E	286	294	Right-handed alpha
Helix 49	AF4	E	336	346	Right-handed alpha
Helix 50	AF5	E	347	358	Right-handed alpha
Helix 51	AF6	E	380	394	Right-handed alpha
Helix 52	AF7	E	404	423	Right-handed alpha
Helix 53	AF8	E	456	463	Right-handed alpha
Helix 54	AF9	E	473	480	Right-handed alpha
Helix 55	AG1	E	486	497	Right-handed alpha
Helix 56	AG2	E	499	510	Right-handed alpha
Helix 57	AG3	E	512	518	Right-handed alpha
Helix 58	AG4	E	534	546	Right-handed alpha
Helix 59	AG5	F	247	250	Right-handed 310
Helix 60	AG6	F	257	262	Right-handed alpha
Helix 61	AG7	F	265	275	Right-handed alpha
Helix 62	AG8	F	318	329	Right-handed alpha
Helix 63	AG9	F	343	355	Right-handed alpha
Helix 64	AH1	F	404	419	Right-handed alpha
Helix 65	AH2	F	428	456	Right-handed alpha
Helix 66	AH3	F	457	461	Right-handed 310
Helix 67	AH4	F	477	488	Right-handed alpha
Helix 68	AH5	F	493	504	Right-handed alpha
Helix 69	AH6	F	506	516	Right-handed alpha
Helix 70	AH7	F	546	559	Right-handed alpha
Helix 71	AH8	G	286	294	Right-handed alpha
Helix 72	AH9	G	336	346	Right-handed alpha
Helix 73	AI1	G	347	358	Right-handed alpha
Helix 74	AI2	G	380	394	Right-handed alpha
Helix 75	AI3	G	404	423	Right-handed alpha
Helix 76	AI4	G	456	462	Right-handed alpha
Helix 77	AI5	G	473	480	Right-handed alpha
Helix 78	AI6	G	486	497	Right-handed alpha
Helix 79	AI7	G	499	510	Right-handed alpha
Helix 80	AI8	G	512	518	Right-handed alpha
Helix 81	AI9	G	534	546	Right-handed alpha
Helix 82	AJ1	H	247	250	Right-handed 310
Helix 83	AJ2	H	257	262	Right-handed alpha
Helix 84	AJ3	H	265	275	Right-handed alpha
Helix 85	AJ4	H	318	329	Right-handed alpha
Helix 86	AJ5	H	343	355	Right-handed alpha
Helix 87	AJ6	H	404	419	Right-handed alpha
Helix 88	AJ7	H	428	456	Right-handed alpha
Helix 89	AJ8	H	457	462	Right-handed 310
Helix 90	AJ9	H	477	488	Right-handed alpha
Helix 91	AK1	H	493	504	Right-handed alpha
Helix 92	AK2	H	506	516	Right-handed alpha
Helix 93	AK3	H	546	559	Right-handed alpha

There are 17 sheets in PDB entry 4P0S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	261	262	first strand
Strand 2	A	428	431	anti-parallel
Strand 3	A	452	455	parallel
Strand 4	A	325	335	anti-parallel
Strand 5	A	308	314	anti-parallel
Strand 6	A	267	274	anti-parallel
Strand 7	A	298	301	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	261	262	first strand
Strand 2	A	428	431	anti-parallel
Strand 3	A	452	455	parallel
Strand 4	A	325	335	anti-parallel
Strand 5	A	363	368	parallel
Strand 6	A	398	401	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	280	282	first strand
Strand 2	B	252	256	parallel
Strand 3	B	290	295	anti-parallel
Strand 4	B	307	308	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	280	282	first strand
Strand 2	B	252	256	parallel
Strand 3	B	290	295	anti-parallel
Strand 4	B	311	317	anti-parallel
Strand 5	B	358	364	parallel
Strand 6	B	422	426	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	261	262	first strand
Strand 2	C	428	431	anti-parallel
Strand 3	C	452	455	parallel
Strand 4	C	325	335	anti-parallel
Strand 5	C	308	314	anti-parallel
Strand 6	C	267	274	anti-parallel
Strand 7	C	298	301	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	261	262	first strand
Strand 2	C	428	431	anti-parallel
Strand 3	C	452	455	parallel
Strand 4	C	325	335	anti-parallel
Strand 5	C	363	368	parallel
Strand 6	C	398	401	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	280	282	first strand
Strand 2	D	252	256	parallel
Strand 3	D	290	295	anti-parallel
Strand 4	D	307	308	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	280	282	first strand
Strand 2	D	252	256	parallel
Strand 3	D	290	295	anti-parallel
Strand 4	D	311	317	anti-parallel
Strand 5	D	358	364	parallel
Strand 6	D	422	426	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	261	262	first strand
Strand 2	E	428	431	anti-parallel
Strand 3	E	452	455	parallel
Strand 4	E	325	335	anti-parallel
Strand 5	E	308	314	anti-parallel
Strand 6	E	267	274	anti-parallel
Strand 7	E	298	301	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	261	262	first strand
Strand 2	E	428	431	anti-parallel
Strand 3	E	452	455	parallel
Strand 4	E	325	335	anti-parallel
Strand 5	E	363	368	parallel
Strand 6	E	398	401	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	524	525	first strand
Strand 2	E	530	531	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	280	282	first strand
Strand 2	F	252	256	parallel
Strand 3	F	290	295	anti-parallel
Strand 4	F	307	308	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	280	282	first strand
Strand 2	F	252	256	parallel
Strand 3	F	290	295	anti-parallel
Strand 4	F	311	317	anti-parallel
Strand 5	F	358	364	parallel
Strand 6	F	422	426	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	261	262	first strand
Strand 2	G	428	431	anti-parallel
Strand 3	G	452	455	parallel
Strand 4	G	325	335	anti-parallel
Strand 5	G	308	314	anti-parallel
Strand 6	G	267	274	anti-parallel
Strand 7	G	298	301	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	261	262	first strand
Strand 2	G	428	431	anti-parallel
Strand 3	G	452	455	parallel
Strand 4	G	325	335	anti-parallel
Strand 5	G	363	368	parallel
Strand 6	G	398	401	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	280	282	first strand
Strand 2	H	252	256	parallel
Strand 3	H	290	295	anti-parallel
Strand 4	H	307	308	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	280	282	first strand
Strand 2	H	252	256	parallel
Strand 3	H	290	295	anti-parallel
Strand 4	H	311	317	anti-parallel
Strand 5	H	358	364	parallel
Strand 6	H	422	426	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4P0S

Analysis of interatomic Contacts of Structural Units in PDB entry:
4P0S