Analysis of interatomic Contacts of Structural Units in PDB entry:
4P29


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4P29 entry

There are 2 chains in PDB entry 4P29 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 33LEU 248
B
 ASN 33LEU 249
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 4P29. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 40Right-handed 310
Helix 2
AA2
A
45 52Right-handed alpha
Helix 3
AA3
A
53 56Right-handed 310
Helix 4
AA4
A
58 76Right-handed alpha
Helix 5
AA5
A
78 88Right-handed alpha
Helix 6
AA6
A
93 111Right-handed alpha
Helix 7
AA7
A
113 123Right-handed alpha
Helix 8
AA8
A
125 129Right-handed 310
Helix 9
AA9
A
130 148Right-handed alpha
Helix 10
AB1
A
150 165Right-handed alpha
Helix 11
AB2
A
167 185Right-handed alpha
Helix 12
AB3
A
186 193Right-handed alpha
Helix 13
AB4
A
198 215Right-handed alpha
Helix 14
AB5
A
217 232Right-handed alpha
Helix 15
AB6
A
235 240Right-handed alpha
Helix 16
AB7
A
242 248Right-handed alpha
Helix 17
AB8
B
34 40Right-handed 310
Helix 18
AB9
B
45 52Right-handed alpha
Helix 19
AC1
B
60 76Right-handed alpha
Helix 20
AC2
B
78 88Right-handed alpha
Helix 21
AC3
B
93 111Right-handed alpha
Helix 22
AC4
B
113 123Right-handed alpha
Helix 23
AC5
B
125 129Right-handed 310
Helix 24
AC6
B
130 148Right-handed alpha
Helix 25
AC7
B
150 165Right-handed alpha
Helix 26
AC8
B
167 185Right-handed alpha
Helix 27
AC9
B
186 192Right-handed alpha
Helix 28
AD1
B
198 215Right-handed alpha
Helix 29
AD2
B
217 232Right-handed alpha
Helix 30
AD3
B
235 240Right-handed alpha
Helix 31
AD4
B
242 249Right-handed alpha
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There are no sheets in PDB entry 4P29
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il