Analysis of interatomic Contacts of Structural Units in PDB entry:
4P40


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4P40 entry

There are 4 chains in PDB entry 4P40 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 96MET 241
A
 GLY 243LEU 248
A
 ARG 250HIS 312
A
 ILE 314ASN 383
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 16 helices in PDB entry 4P40. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
96 102Right-handed alpha
Helix 2
AA2
A
108 119Right-handed alpha
Helix 3
AA3
A
124 136Right-handed alpha
Helix 4
AA4
A
138 152Right-handed alpha
Helix 5
AA5
A
154 156Right-handed 310
Helix 6
AA6
A
157 176Right-handed alpha
Helix 7
AA7
A
176 185Right-handed alpha
Helix 8
AA8
A
185 197Right-handed alpha
Helix 9
AA9
A
199 212Right-handed alpha
Helix 10
AB1
A
216 226Right-handed alpha
Helix 11
AB2
A
229 251Right-handed alpha
Helix 12
AB3
A
256 294Right-handed alpha
Helix 13
AB4
A
303 317Right-handed alpha
Helix 14
AB5
A
321 334Right-handed alpha
Helix 15
AB6
A
336 354Right-handed alpha
Helix 16
AB7
A
361 383Right-handed alpha
Back to top of page
There are no sheets in PDB entry 4P40
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il