Analysis of interatomic Contacts of Structural Units in PDB entry:
4P47


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4P47 entry

There is 1 chain in PDB entry 4P47 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 26GLN 345
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 4P47. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 59Right-handed alpha
Helix 2
AA2
A
75 85Right-handed alpha
Helix 3
AA3
A
96 101Right-handed 310
Helix 4
AA4
A
102 110Right-handed 310
Helix 5
AA5
A
116 126Right-handed alpha
Helix 6
AA6
A
126 134Right-handed alpha
Helix 7
AA7
A
135 139Right-handed 310
Helix 8
AA8
A
163 168Right-handed alpha
Helix 9
AA9
A
177 187Right-handed alpha
Helix 10
AB1
A
195 197Right-handed 310
Helix 11
AB2
A
198 206Right-handed alpha
Helix 12
AB3
A
215 221Right-handed alpha
Helix 13
AB4
A
222 226Right-handed 310
Helix 14
AB5
A
246 250Right-handed alpha
Helix 15
AB6
A
253 289Right-handed alpha
Helix 16
AB7
A
297 313Right-handed alpha
Helix 17
AB8
A
315 320Right-handed alpha
Helix 18
AB9
A
320 337Right-handed alpha
Helix 19
AC1
A
338 343Right-handed 310
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There are 2 sheets in PDB entry 4P47. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 68first strand
Strand 2
A
30 35parallel
Strand 3
A
90 94parallel
Strand 4
A
229 245anti-parallel
Strand 5
A
141 156anti-parallel
Strand 6
A
210 213anti-parallel
Strand 7
A
171 173parallel
Strand 8
A
190 192parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 68first strand
Strand 2
A
30 35parallel
Strand 3
A
90 94parallel
Strand 4
A
229 245anti-parallel
Strand 5
A
292 295parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il