Analysis of interatomic Contacts of Structural Units in PDB entry:
4P4T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4P4T entry

There is 1 chain in PDB entry 4P4T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 44GLY 662
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 4P4T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 61Right-handed alpha
Helix 2
AA2
A
82 92Right-handed alpha
Helix 3
AA3
A
135 137Right-handed 310
Helix 4
AA4
A
138 151Right-handed alpha
Helix 5
AA5
A
193 207Right-handed alpha
Helix 6
AA6
A
222 225Right-handed 310
Helix 7
AA7
A
226 236Right-handed alpha
Helix 8
AA8
A
248 252Right-handed 310
Helix 9
AA9
A
256 265Right-handed alpha
Helix 10
AB1
A
282 288Right-handed alpha
Helix 11
AB2
A
291 306Right-handed alpha
Helix 12
AB3
A
309 315Right-handed alpha
Helix 13
AB4
A
319 339Right-handed alpha
Helix 14
AB5
A
341 360Right-handed alpha
Helix 15
AB6
A
640 660Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 4P4T.

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 133first strand
Strand 2
A
121 126anti-parallel
Strand 3
A
162 168anti-parallel
Strand 4
A
107 113parallel
Strand 5
A
174 178anti-parallel
Strand 6
A
72 77parallel
Strand 7
A
211 218parallel
Strand 8
A
242 247parallel
Strand 9
A
275 277parallel
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