Analysis of interatomic Contacts of Structural Units in PDB entry:
4P5I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4P5I entry

There is 1 chain in PDB entry 4P5I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 5ASN 270
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 4 helices in PDB entry 4P5I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 21Right-handed alpha
Helix 2
AA2
A
128 142Right-handed alpha
Helix 3
AA3
A
227 231Right-handed 310
Helix 4
AA4
A
244 252Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 4P5I. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 202first strand
Strand 2
A
237 242parallel
Strand 3
A
214 225anti-parallel
Strand 4
A
27 37anti-parallel
Strand 5
A
108 116anti-parallel
Strand 6
A
94 101anti-parallel
Strand 7
A
260 265anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 59first strand
Strand 2
A
66 76anti-parallel
Strand 3
A
79 88anti-parallel
Strand 4
A
143 149anti-parallel
Strand 5
A
205 209parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il