Analysis of interatomic Contacts of Structural Units in PDB entry:
4P62


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4P62 entry

There is 1 chain in PDB entry 4P62 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 27ALA 295
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 4P62. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
79 90Right-handed alpha
Helix 2
AA2
A
93 95Right-handed 310
Helix 3
AA3
A
106 111Right-handed alpha
Helix 4
AA4
A
112 121Right-handed alpha
Helix 5
AA5
A
130 137Right-handed alpha
Helix 6
AA6
A
145 149Right-handed 310
Helix 7
AA7
A
220 224Right-handed 310
Helix 8
AA8
A
226 240Right-handed alpha
Helix 9
AA9
A
250 259Right-handed 310
Helix 10
AB1
A
272 295Right-handed alpha
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There are 2 sheets in PDB entry 4P62. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 47first strand
Strand 2
A
50 52anti-parallel
Strand 3
A
61 63anti-parallel
Strand 4
A
69 72anti-parallel
Strand 5
A
97 101parallel
Strand 6
A
124 127parallel
Strand 7
A
158 161parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 169first strand
Strand 2
A
172 178anti-parallel
Strand 3
A
187 195anti-parallel
Strand 4
A
198 204anti-parallel
Strand 5
A
245 247parallel
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