Analysis of interatomic Contacts of Structural Units in PDB entry:
4P6S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4P6S entry

There are 2 chains in PDB entry 4P6S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 5LEU 290
B
 LYS 4LEU 290
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 4P6S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 14Right-handed 310
Helix 2
AA2
A
15 32Right-handed alpha
Helix 3
AA3
A
34 47Right-handed alpha
Helix 4
AA4
A
64 84Right-handed alpha
Helix 5
AA5
A
93 98Right-handed alpha
Helix 6
AA6
A
102 110Right-handed 310
Helix 7
AA7
A
119 123Right-handed 310
Helix 8
AA8
A
164 173Right-handed alpha
Helix 9
AA9
A
189 196Right-handed alpha
Helix 10
AB1
A
202 212Right-handed alpha
Helix 11
AB2
A
213 217Right-handed 310
Helix 12
AB3
A
220 224Right-handed 310
Helix 13
AB4
A
225 245Right-handed alpha
Helix 14
AB5
A
272 277Right-handed 310
Helix 15
AB6
B
10 14Right-handed 310
Helix 16
AB7
B
15 32Right-handed alpha
Helix 17
AB8
B
34 47Right-handed alpha
Helix 18
AB9
B
64 84Right-handed alpha
Helix 19
AC1
B
93 98Right-handed alpha
Helix 20
AC2
B
102 110Right-handed 310
Helix 21
AC3
B
119 123Right-handed 310
Helix 22
AC4
B
164 174Right-handed alpha
Helix 23
AC5
B
189 196Right-handed alpha
Helix 24
AC6
B
203 212Right-handed alpha
Helix 25
AC7
B
213 224Right-handed 310
Helix 26
AC8
B
225 245Right-handed alpha
Helix 27
AC9
B
272 277Right-handed 310
Helix 28
AD1
B
278 282Right-handed 310
Helix 29
AD2
B
288 290Right-handed 310
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There are 2 sheets in PDB entry 4P6S. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 8first strand
Strand 2
A
284 286parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 8first strand
Strand 2
B
284 286parallel
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