Analysis of interatomic Contacts of Structural Units in PDB entry:
4P6Z

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4P6Z entry

There are 4 chains in PDB entry 4P6Z (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
G	PRO 2	GLU 588
S	MET 1	SER 147
M	SER 2	GLN 423
B	GLU 14	THR 109

There are 94 helices in PDB entry 4P6Z. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	G	6	16	Right-handed alpha
Helix 2	AA2	G	19	40	Right-handed alpha
Helix 3	AA3	G	45	59	Right-handed alpha
Helix 4	AA4	G	63	65	Right-handed 310
Helix 5	AA5	G	66	75	Right-handed alpha
Helix 6	AA6	G	78	93	Right-handed alpha
Helix 7	AA7	G	99	112	Right-handed alpha
Helix 8	AA8	G	115	130	Right-handed alpha
Helix 9	AA9	G	131	147	Right-handed alpha
Helix 10	AB1	G	150	168	Right-handed alpha
Helix 11	AB2	G	169	174	Right-handed 310
Helix 12	AB3	G	175	180	Right-handed alpha
Helix 13	AB4	G	187	205	Right-handed alpha
Helix 14	AB5	G	205	213	Right-handed alpha
Helix 15	AB6	G	215	229	Right-handed alpha
Helix 16	AB7	G	242	256	Right-handed alpha
Helix 17	AB8	G	261	278	Right-handed alpha
Helix 18	AB9	G	282	299	Right-handed alpha
Helix 19	AC1	G	302	318	Right-handed alpha
Helix 20	AC2	G	321	335	Right-handed alpha
Helix 21	AC3	G	339	344	Right-handed alpha
Helix 22	AC4	G	346	353	Right-handed alpha
Helix 23	AC5	G	354	356	Right-handed 310
Helix 24	AC6	G	358	371	Right-handed alpha
Helix 25	AC7	G	377	391	Right-handed alpha
Helix 26	AC8	G	393	411	Right-handed alpha
Helix 27	AC9	G	414	429	Right-handed alpha
Helix 28	AD1	G	430	433	Right-handed 310
Helix 29	AD2	G	434	436	Right-handed 310
Helix 30	AD3	G	437	447	Right-handed alpha
Helix 31	AD4	G	452	466	Right-handed alpha
Helix 32	AD5	G	469	483	Right-handed alpha
Helix 33	AD6	G	483	489	Right-handed alpha
Helix 34	AD7	G	502	515	Right-handed alpha
Helix 35	AD8	G	519	537	Right-handed alpha
Helix 36	AD9	G	540	551	Right-handed alpha
Helix 37	AE1	G	552	554	Right-handed 310
Helix 38	AE2	G	556	573	Right-handed alpha
Helix 39	AE3	G	575	581	Right-handed alpha
Helix 40	AE4	S	24	41	Right-handed alpha
Helix 41	AE5	S	76	96	Right-handed alpha
Helix 42	AE6	S	99	106	Right-handed alpha
Helix 43	AE7	S	106	117	Right-handed alpha
Helix 44	AE8	S	127	147	Right-handed alpha
Helix 45	AE9	M	26	31	Right-handed 310
Helix 46	AF1	M	32	44	Right-handed alpha
Helix 47	AF2	M	76	95	Right-handed alpha
Helix 48	AF3	M	99	106	Right-handed alpha
Helix 49	AF4	M	106	117	Right-handed alpha
Helix 50	AF5	M	127	132	Right-handed alpha
Helix 51	AF6	M	150	155	Right-handed 310
Helix 52	AF7	M	216	222	Right-handed alpha
Helix 53	AF8	M	243	251	Right-handed alpha
Helix 54	AF9	M	336	338	Right-handed 310
Helix 55	AG1	B	15	24	Right-handed alpha
Helix 56	AG2	B	26	43	Right-handed alpha
Helix 57	AG3	B	47	49	Right-handed 310
Helix 58	AG4	B	50	56	Right-handed alpha
Helix 59	AG5	B	62	77	Right-handed alpha
Helix 60	AG6	B	82	86	Right-handed 310
Helix 61	AG7	B	87	95	Right-handed alpha
Helix 62	AG8	B	99	111	Right-handed alpha
Helix 63	AG9	B	115	131	Right-handed alpha
Helix 64	AH1	B	134	152	Right-handed alpha
Helix 65	AH2	B	152	160	Right-handed alpha
Helix 66	AH3	B	160	169	Right-handed alpha
Helix 67	AH4	B	173	191	Right-handed alpha
Helix 68	AH5	B	200	214	Right-handed alpha
Helix 69	AH6	B	215	229	Right-handed alpha
Helix 70	AH7	B	233	245	Right-handed alpha
Helix 71	AH8	B	246	250	Right-handed 310
Helix 72	AH9	B	252	267	Right-handed alpha
Helix 73	AI1	B	268	270	Right-handed 310
Helix 74	AI2	B	274	291	Right-handed alpha
Helix 75	AI3	B	292	294	Right-handed 310
Helix 76	AI4	B	295	313	Right-handed alpha
Helix 77	AI5	B	320	325	Right-handed 310
Helix 78	AI6	B	331	346	Right-handed alpha
Helix 79	AI7	B	350	362	Right-handed alpha
Helix 80	AI8	B	366	384	Right-handed alpha
Helix 81	AI9	B	386	400	Right-handed alpha
Helix 82	AJ1	B	403	421	Right-handed alpha
Helix 83	AJ2	B	427	432	Right-handed alpha
Helix 84	AJ3	B	433	435	Right-handed 310
Helix 85	AJ4	B	441	455	Right-handed alpha
Helix 86	AJ5	B	461	468	Right-handed alpha
Helix 87	AJ6	B	477	495	Right-handed alpha
Helix 88	AJ7	B	499	512	Right-handed alpha
Helix 89	AJ8	B	516	533	Right-handed alpha
Helix 90	AJ9	B	533	541	Right-handed alpha
Helix 91	AK1	B	556	565	Right-handed alpha
Helix 92	AK2	B	569	575	Right-handed alpha
Helix 93	AK3	B	577	581	Right-handed 310
Helix 94	AK4	V	59	63	Right-handed 310

There are 9 sheets in PDB entry 4P6Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	236	237	first strand
Strand 2	G	240	241	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	14	19	first strand
Strand 2	S	2	9	anti-parallel
Strand 3	S	65	71	anti-parallel
Strand 4	S	55	62	anti-parallel
Strand 5	S	49	52	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	118	119	first strand
Strand 2	S	122	123	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	15	20	first strand
Strand 2	M	5	9	anti-parallel
Strand 3	M	65	71	anti-parallel
Strand 4	M	55	62	anti-parallel
Strand 5	M	49	52	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	118	119	first strand
Strand 2	M	122	123	anti-parallel

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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	235	238	first strand
Strand 2	M	260	270	anti-parallel
Strand 3	M	189	203	anti-parallel
Strand 4	M	170	183	anti-parallel
Strand 5	M	406	420	parallel
Strand 6	M	376	383	anti-parallel
Strand 7	M	306	315	anti-parallel
Strand 8	M	340	349	anti-parallel
Strand 9	M	331	335	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	235	238	first strand
Strand 2	M	260	270	anti-parallel
Strand 3	M	189	203	anti-parallel
Strand 4	M	170	183	anti-parallel
Strand 5	M	406	420	parallel
Strand 6	T	9	10	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	253	255	first strand
Strand 2	M	209	214	anti-parallel
Strand 3	M	392	398	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	277	286	first strand
Strand 2	M	290	299	anti-parallel
Strand 3	M	353	361	anti-parallel
Strand 4	M	321	327	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4P6Z

Analysis of interatomic Contacts of Structural Units in PDB entry:
4P6Z