Analysis of interatomic Contacts of Structural Units in PDB entry:
4P7G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4P7G entry

There are 4 chains in PDB entry 4P7G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 45GLY 257
B
 GLY 45PRO 258
C
 GLY 45PRO 258
D
 GLY 45PRO 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 41 helices in PDB entry 4P7G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
47 60Right-handed alpha
Helix 2
AA2
A
64 79Right-handed alpha
Helix 3
AA3
A
88 101Right-handed alpha
Helix 4
AA4
A
113 121Right-handed alpha
Helix 5
AA5
A
135 150Right-handed alpha
Helix 6
AA6
A
161 166Right-handed alpha
Helix 7
AA7
A
168 173Right-handed alpha
Helix 8
AA8
A
186 188Right-handed 310
Helix 9
AA9
A
189 200Right-handed alpha
Helix 10
AB1
A
219 229Right-handed alpha
Helix 11
AB2
B
47 60Right-handed alpha
Helix 12
AB3
B
64 79Right-handed alpha
Helix 13
AB4
B
88 101Right-handed alpha
Helix 14
AB5
B
113 121Right-handed alpha
Helix 15
AB6
B
135 150Right-handed alpha
Helix 16
AB7
B
161 166Right-handed alpha
Helix 17
AB8
B
168 173Right-handed alpha
Helix 18
AB9
B
186 188Right-handed 310
Helix 19
AC1
B
189 200Right-handed alpha
Helix 20
AC2
B
221 229Right-handed alpha
Helix 21
AC3
C
47 60Right-handed alpha
Helix 22
AC4
C
64 79Right-handed alpha
Helix 23
AC5
C
87 101Right-handed alpha
Helix 24
AC6
C
113 121Right-handed alpha
Helix 25
AC7
C
135 150Right-handed alpha
Helix 26
AC8
C
161 166Right-handed alpha
Helix 27
AC9
C
168 173Right-handed alpha
Helix 28
AD1
C
186 188Right-handed 310
Helix 29
AD2
C
189 200Right-handed alpha
Helix 30
AD3
C
221 229Right-handed alpha
Helix 31
AD4
D
47 60Right-handed alpha
Helix 32
AD5
D
64 79Right-handed alpha
Helix 33
AD6
D
84 89Right-handed alpha
Helix 34
AD7
D
89 101Right-handed alpha
Helix 35
AD8
D
113 121Right-handed alpha
Helix 36
AD9
D
135 150Right-handed alpha
Helix 37
AE1
D
161 166Right-handed alpha
Helix 38
AE2
D
168 173Right-handed alpha
Helix 39
AE3
D
186 188Right-handed 310
Helix 40
AE4
D
189 200Right-handed alpha
Helix 41
AE5
D
221 229Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 4P7G. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 14 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 159first strand
Strand 2
A
128 133parallel
Strand 3
A
104 108parallel
Strand 4
A
180 183parallel
Strand 5
A
208 212parallel
Strand 6
A
248 255anti-parallel
Strand 7
A
232 241anti-parallel
Strand 8
B
232 241anti-parallel
Strand 9
B
248 255anti-parallel
Strand 10
B
208 211anti-parallel
Strand 11
B
180 183parallel
Strand 12
B
104 108parallel
Strand 13
B
128 133parallel
Strand 14
B
155 159parallel
Back to list of sheets
Back to top of page

There are 14 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
155 159first strand
Strand 2
C
128 133parallel
Strand 3
C
104 108parallel
Strand 4
C
180 183parallel
Strand 5
C
208 211parallel
Strand 6
C
248 255anti-parallel
Strand 7
C
232 241anti-parallel
Strand 8
D
232 241anti-parallel
Strand 9
D
248 255anti-parallel
Strand 10
D
208 211anti-parallel
Strand 11
D
180 183parallel
Strand 12
D
104 108parallel
Strand 13
D
128 133parallel
Strand 14
D
155 159parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il