Analysis of interatomic Contacts of Structural Units in PDB entry:
4P7L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4P7L entry

There is 1 chain in PDB entry 4P7L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 310ALA 666
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 4P7L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
328 347Right-handed alpha
Helix 2
AA2
A
381 392Right-handed alpha
Helix 3
AA3
A
439 457Right-handed alpha
Helix 4
AA4
A
477 487Right-handed alpha
Helix 5
AA5
A
492 497Right-handed alpha
Helix 6
AA6
A
499 530Right-handed alpha
Helix 7
AA7
A
540 546Right-handed alpha
Helix 8
AA8
A
547 553Right-handed 310
Helix 9
AA9
A
556 564Right-handed alpha
Helix 10
AB1
A
579 581Right-handed 310
Helix 11
AB2
A
582 595Right-handed alpha
Helix 12
AB3
A
600 602Right-handed 310
Helix 13
AB4
A
623 637Right-handed alpha
Helix 14
AB5
A
648 652Right-handed 310
Helix 15
AB6
A
655 664Right-handed alpha
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There are 2 sheets in PDB entry 4P7L. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
315 319first strand
Strand 2
A
350 354parallel
Strand 3
A
396 401parallel
Strand 4
A
461 464parallel
Strand 5
A
534 539parallel
Strand 6
A
566 570parallel
Strand 7
A
604 609parallel
Strand 8
A
642 645parallel
Strand 9
A
315 319parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
611 613first strand
Strand 2
A
619 621anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il