Analysis of interatomic Contacts of Structural Units in PDB entry:
4P7O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4P7O entry

There are 2 chains in PDB entry 4P7O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 312PRO 669
B
 SER 312PRO 669
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 4P7O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
320 324Right-handed 310
Helix 2
AA2
A
328 347Right-handed alpha
Helix 3
AA3
A
381 393Right-handed alpha
Helix 4
AA4
A
439 455Right-handed alpha
Helix 5
AA5
A
477 488Right-handed alpha
Helix 6
AA6
A
492 498Right-handed alpha
Helix 7
AA7
A
499 530Right-handed alpha
Helix 8
AA8
A
540 546Right-handed alpha
Helix 9
AA9
A
547 553Right-handed 310
Helix 10
AB1
A
556 564Right-handed alpha
Helix 11
AB2
A
579 581Right-handed 310
Helix 12
AB3
A
582 596Right-handed alpha
Helix 13
AB4
A
599 602Right-handed 310
Helix 14
AB5
A
623 637Right-handed alpha
Helix 15
AB6
A
648 652Right-handed 310
Helix 16
AB7
A
655 660Right-handed alpha
Helix 17
AB8
A
661 663Right-handed 310
Helix 18
AB9
B
320 324Right-handed 310
Helix 19
AC1
B
328 347Right-handed alpha
Helix 20
AC2
B
381 393Right-handed alpha
Helix 21
AC3
B
439 457Right-handed alpha
Helix 22
AC4
B
477 487Right-handed alpha
Helix 23
AC5
B
492 499Right-handed alpha
Helix 24
AC6
B
499 530Right-handed alpha
Helix 25
AC7
B
540 546Right-handed alpha
Helix 26
AC8
B
547 553Right-handed 310
Helix 27
AC9
B
556 564Right-handed alpha
Helix 28
AD1
B
579 581Right-handed 310
Helix 29
AD2
B
582 596Right-handed alpha
Helix 30
AD3
B
600 602Right-handed 310
Helix 31
AD4
B
623 637Right-handed alpha
Helix 32
AD5
B
648 652Right-handed 310
Helix 33
AD6
B
655 660Right-handed alpha
Helix 34
AD7
B
661 663Right-handed 310
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There are 4 sheets in PDB entry 4P7O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
315 319first strand
Strand 2
A
350 354parallel
Strand 3
A
396 401parallel
Strand 4
A
461 464parallel
Strand 5
A
534 539parallel
Strand 6
A
566 570parallel
Strand 7
A
604 609parallel
Strand 8
A
642 645parallel
Strand 9
A
315 319parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
611 612first strand
Strand 2
A
620 621anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
315 319first strand
Strand 2
B
350 354parallel
Strand 3
B
396 401parallel
Strand 4
B
461 464parallel
Strand 5
B
534 539parallel
Strand 6
B
566 570parallel
Strand 7
B
604 609parallel
Strand 8
B
642 645parallel
Strand 9
B
315 319parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
611 612first strand
Strand 2
B
620 621anti-parallel
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