Analysis of interatomic Contacts of Structural Units in PDB entry:
4P7X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4P7X entry

There is 1 chain in PDB entry 4P7X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO -5TYR 280
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4P7X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 24Right-handed alpha
Helix 2
AA2
A
32 34Right-handed 310
Helix 3
AA3
A
67 72Right-handed alpha
Helix 4
AA4
A
73 84Right-handed alpha
Helix 5
AA5
A
85 87Right-handed 310
Helix 6
AA6
A
176 180Right-handed 310
Helix 7
AA7
A
201 210Right-handed alpha
Helix 8
AA8
A
211 214Right-handed 310
Helix 9
AA9
A
219 230Right-handed alpha
Helix 10
AB1
A
231 233Right-handed 310
Helix 11
AB2
A
239 253Right-handed alpha
Helix 12
AB3
A
254 270Right-handed alpha
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There are 2 sheets in PDB entry 4P7X. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 8first strand
Strand 2
A
144 148anti-parallel
Strand 3
A
116 124anti-parallel
Strand 4
A
164 172anti-parallel
Strand 5
A
89 97anti-parallel
Strand 6
A
40 47anti-parallel
Strand 7
A
65 66anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 37first strand
Strand 2
A
101 106anti-parallel
Strand 3
A
154 158anti-parallel
Strand 4
A
129 133anti-parallel
Strand 5
A
136 138anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il