Analysis of interatomic Contacts of Structural Units in PDB entry:
4PC8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4PC8 entry

There is 1 chain in PDB entry 4PC8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1GLN 250
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 4PC8. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
17 31Right-handed alpha
Helix 2
AA2
A
44 55Right-handed alpha
Helix 3
AA3
A
69 87Right-handed alpha
Helix 4
AA4
A
94 103Right-handed alpha
Helix 5
AA5
A
105 119Right-handed alpha
Helix 6
AA6
A
130 136Right-handed alpha
Helix 7
AA7
A
138 153Right-handed alpha
Helix 8
AA8
A
154 160Right-handed 310
Helix 9
AA9
A
168 172Right-handed 310
Helix 10
AB1
A
179 198Right-handed alpha
Helix 11
AB2
A
199 206Right-handed alpha
Helix 12
AB3
A
218 224Right-handed alpha
Helix 13
AB4
A
241 249Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 4PC8.

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
7 12first strand
Strand 2
A
38 43parallel
Strand 3
A
60 65parallel
Strand 4
A
90 93parallel
Strand 5
A
122 127parallel
Strand 6
A
162 166parallel
Strand 7
A
208 211parallel
Strand 8
A
230 234parallel
Strand 9
A
7 12parallel
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