Analysis of interatomic Contacts of Structural Units in PDB entry:
4PEV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4PEV entry

There are 3 chains in PDB entry 4PEV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 77GLU 446
B
 PRO 77GLU 446
C
 PRO 77GLU 446
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 4PEV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
93 110Right-handed alpha
Helix 2
AA2
A
120 122Right-handed 310
Helix 3
AA3
A
123 135Right-handed alpha
Helix 4
AA4
A
147 155Right-handed alpha
Helix 5
AA5
A
156 158Right-handed 310
Helix 6
AA6
A
184 207Right-handed alpha
Helix 7
AA7
A
220 242Right-handed alpha
Helix 8
AA8
A
257 271Right-handed alpha
Helix 9
AA9
A
282 297Right-handed alpha
Helix 10
AB1
A
310 314Right-handed 310
Helix 11
AB2
A
325 339Right-handed alpha
Helix 12
AB3
A
360 373Right-handed alpha
Helix 13
AB4
A
382 398Right-handed alpha
Helix 14
AB5
A
399 415Right-handed alpha
Helix 15
AB6
A
425 438Right-handed alpha
Helix 16
AB7
A
440 445Right-handed 310
Helix 17
AB8
B
93 110Right-handed alpha
Helix 18
AB9
B
120 122Right-handed 310
Helix 19
AC1
B
123 135Right-handed alpha
Helix 20
AC2
B
147 155Right-handed alpha
Helix 21
AC3
B
184 207Right-handed alpha
Helix 22
AC4
B
220 242Right-handed alpha
Helix 23
AC5
B
257 271Right-handed alpha
Helix 24
AC6
B
280 282Right-handed 310
Helix 25
AC7
B
283 297Right-handed alpha
Helix 26
AC8
B
310 314Right-handed 310
Helix 27
AC9
B
325 339Right-handed alpha
Helix 28
AD1
B
360 375Right-handed alpha
Helix 29
AD2
B
382 398Right-handed alpha
Helix 30
AD3
B
399 415Right-handed alpha
Helix 31
AD4
B
425 438Right-handed alpha
Helix 32
AD5
B
440 445Right-handed 310
Helix 33
AD6
C
93 110Right-handed alpha
Helix 34
AD7
C
123 134Right-handed alpha
Helix 35
AD8
C
147 158Right-handed alpha
Helix 36
AD9
C
183 207Right-handed alpha
Helix 37
AE1
C
220 240Right-handed alpha
Helix 38
AE2
C
257 271Right-handed alpha
Helix 39
AE3
C
282 297Right-handed alpha
Helix 40
AE4
C
310 314Right-handed 310
Helix 41
AE5
C
325 339Right-handed alpha
Helix 42
AE6
C
360 374Right-handed alpha
Helix 43
AE7
C
382 398Right-handed alpha
Helix 44
AE8
C
399 415Right-handed alpha
Helix 45
AE9
C
425 438Right-handed alpha
Helix 46
AF1
C
440 445Right-handed 310
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There are 6 sheets in PDB entry 4PEV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 116first strand
Strand 2
A
79 84parallel
Strand 3
A
139 143parallel
Strand 4
A
162 166parallel
Strand 5
A
177 182parallel
Strand 6
A
345 349parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 251first strand
Strand 2
A
211 216parallel
Strand 3
A
273 279parallel
Strand 4
A
302 307parallel
Strand 5
A
318 324parallel
Strand 6
A
356 358anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
112 116first strand
Strand 2
B
79 84parallel
Strand 3
B
139 143parallel
Strand 4
B
163 166parallel
Strand 5
B
177 182parallel
Strand 6
B
345 349parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
247 251first strand
Strand 2
B
211 216parallel
Strand 3
B
273 279parallel
Strand 4
B
302 307parallel
Strand 5
B
318 324parallel
Strand 6
B
356 358anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
112 116first strand
Strand 2
C
79 84parallel
Strand 3
C
139 143parallel
Strand 4
C
162 166parallel
Strand 5
C
177 182parallel
Strand 6
C
345 349parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
247 251first strand
Strand 2
C
211 216parallel
Strand 3
C
273 279parallel
Strand 4
C
302 307parallel
Strand 5
C
318 324parallel
Strand 6
C
356 358anti-parallel
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