Analysis of interatomic Contacts of Structural Units in PDB entry:
4PL3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4PL3 entry

There are 2 chains in PDB entry 4PL3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 560GLU 964
B
 ARG 562SER 822
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 4PL3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
609 618Right-handed alpha
Helix 2
AA2
A
649 655Right-handed alpha
Helix 3
AA3
A
664 681Right-handed alpha
Helix 4
AA4
A
690 692Right-handed 310
Helix 5
AA5
A
739 743Right-handed 310
Helix 6
AA6
A
752 769Right-handed alpha
Helix 7
AA7
A
780 788Right-handed alpha
Helix 8
AA8
A
799 813Right-handed alpha
Helix 9
AA9
A
816 820Right-handed 310
Helix 10
AB1
A
822 829Right-handed alpha
Helix 11
AB2
A
830 833Right-handed 310
Helix 12
AB3
A
834 850Right-handed alpha
Helix 13
AB4
A
856 863Right-handed alpha
Helix 14
AB5
A
866 871Right-handed alpha
Helix 15
AB6
A
873 878Right-handed 310
Helix 16
AB7
A
879 888Right-handed alpha
Helix 17
AB8
A
896 910Right-handed alpha
Helix 18
AB9
A
911 914Right-handed 310
Helix 19
AC1
A
915 922Right-handed alpha
Helix 20
AC2
A
926 937Right-handed alpha
Helix 21
AC3
A
937 948Right-handed alpha
Helix 22
AC4
A
956 960Right-handed 310
Helix 23
AC5
B
609 618Right-handed alpha
Helix 24
AC6
B
649 655Right-handed alpha
Helix 25
AC7
B
664 682Right-handed alpha
Helix 26
AC8
B
690 692Right-handed 310
Helix 27
AC9
B
739 743Right-handed 310
Helix 28
AD1
B
753 769Right-handed alpha
Helix 29
AD2
B
779 788Right-handed alpha
Helix 30
AD3
B
799 813Right-handed alpha
Helix 31
AD4
B
829 833Right-handed 310
Helix 32
AD5
B
834 850Right-handed alpha
Helix 33
AD6
B
856 863Right-handed alpha
Helix 34
AD7
B
866 871Right-handed alpha
Helix 35
AD8
B
873 878Right-handed 310
Helix 36
AD9
B
879 888Right-handed alpha
Helix 37
AE1
B
896 910Right-handed alpha
Helix 38
AE2
B
911 914Right-handed 310
Helix 39
AE3
B
915 922Right-handed alpha
Helix 40
AE4
B
926 937Right-handed alpha
Helix 41
AE5
B
937 948Right-handed alpha
Helix 42
AE6
B
949 952Right-handed 310
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There are 5 sheets in PDB entry 4PL3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
570 579first strand
Strand 2
A
585 590anti-parallel
Strand 3
A
597 601anti-parallel
Strand 4
A
637 642anti-parallel
Strand 5
A
628 634anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
606 608first strand
Strand 2
A
714 716anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
647 648first strand
Strand 2
A
694 696anti-parallel
Strand 3
A
707 709anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
570 579first strand
Strand 2
B
585 590anti-parallel
Strand 3
B
595 601anti-parallel
Strand 4
B
638 642anti-parallel
Strand 5
B
628 633anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
647 648first strand
Strand 2
B
694 696anti-parallel
Strand 3
B
707 709anti-parallel
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