Analysis of interatomic Contacts of Structural Units in PDB entry:
4PLE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4PLE entry

There are 8 chains in PDB entry 4PLE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 298ALA 538
B
 ASN 742ASP 750
C
 ALA 299ALA 538
D
 ASN 742LYS 751
E
 ALA 297HIS 537
F
 ASN 742LYS 751
G
 ALA 298ALA 538
H
 ASN 742LYS 751
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 4PLE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
302 311Right-handed alpha
Helix 2
AA2
A
314 332Right-handed alpha
Helix 3
AA3
A
334 338Right-handed 310
Helix 4
AA4
A
340 363Right-handed alpha
Helix 5
AA5
A
365 369Right-handed 310
Helix 6
AA6
A
370 398Right-handed alpha
Helix 7
AA7
A
413 420Right-handed alpha
Helix 8
AA8
A
421 441Right-handed alpha
Helix 9
AA9
A
444 457Right-handed alpha
Helix 10
AB1
A
466 489Right-handed alpha
Helix 11
AB2
A
494 501Right-handed alpha
Helix 12
AB3
A
502 523Right-handed alpha
Helix 13
AB4
A
530 538Right-handed alpha
Helix 14
AB5
B
743 749Right-handed alpha
Helix 15
AB6
C
302 311Right-handed alpha
Helix 16
AB7
C
314 332Right-handed alpha
Helix 17
AB8
C
334 338Right-handed 310
Helix 18
AB9
C
340 363Right-handed alpha
Helix 19
AC1
C
365 369Right-handed 310
Helix 20
AC2
C
370 398Right-handed alpha
Helix 21
AC3
C
413 420Right-handed alpha
Helix 22
AC4
C
421 441Right-handed alpha
Helix 23
AC5
C
444 457Right-handed alpha
Helix 24
AC6
C
466 489Right-handed alpha
Helix 25
AC7
C
494 501Right-handed alpha
Helix 26
AC8
C
502 523Right-handed alpha
Helix 27
AC9
C
530 538Right-handed alpha
Helix 28
AD1
D
743 749Right-handed alpha
Helix 29
AD2
E
302 311Right-handed alpha
Helix 30
AD3
E
314 332Right-handed alpha
Helix 31
AD4
E
334 338Right-handed 310
Helix 32
AD5
E
340 362Right-handed alpha
Helix 33
AD6
E
365 369Right-handed 310
Helix 34
AD7
E
370 398Right-handed alpha
Helix 35
AD8
E
413 420Right-handed alpha
Helix 36
AD9
E
421 441Right-handed alpha
Helix 37
AE1
E
444 457Right-handed alpha
Helix 38
AE2
E
466 489Right-handed alpha
Helix 39
AE3
E
494 501Right-handed alpha
Helix 40
AE4
E
502 523Right-handed alpha
Helix 41
AE5
E
531 537Right-handed alpha
Helix 42
AE6
F
743 751Right-handed alpha
Helix 43
AE7
G
302 311Right-handed alpha
Helix 44
AE8
G
314 332Right-handed alpha
Helix 45
AE9
G
334 338Right-handed 310
Helix 46
AF1
G
340 363Right-handed alpha
Helix 47
AF2
G
365 369Right-handed 310
Helix 48
AF3
G
370 398Right-handed alpha
Helix 49
AF4
G
413 420Right-handed alpha
Helix 50
AF5
G
421 441Right-handed alpha
Helix 51
AF6
G
444 457Right-handed alpha
Helix 52
AF7
G
466 489Right-handed alpha
Helix 53
AF8
G
494 501Right-handed alpha
Helix 54
AF9
G
502 523Right-handed alpha
Helix 55
AG1
G
531 538Right-handed alpha
Helix 56
AG2
H
743 751Right-handed alpha
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There are 4 sheets in PDB entry 4PLE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
402 404first strand
Strand 2
A
410 412anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
402 404first strand
Strand 2
C
410 412anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
402 404first strand
Strand 2
E
410 412anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
402 404first strand
Strand 2
G
410 412anti-parallel
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