Analysis of interatomic Contacts of Structural Units in PDB entry:
4POO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4POO entry

There are 2 chains in PDB entry 4POO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 6ALA 190
B
 PRO 0ALA 190
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 4POO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 18Right-handed alpha
Helix 2
2
A
32 43Right-handed alpha
Helix 3
3
A
54 71Right-handed alpha
Helix 4
4
A
79 81Right-handed 310
Helix 5
5
A
82 87Right-handed alpha
Helix 6
6
A
88 92Right-handed 310
Helix 7
7
A
115 129Right-handed alpha
Helix 8
8
A
147 160Right-handed alpha
Helix 9
9
B
5 18Right-handed alpha
Helix 10
10
B
32 43Right-handed alpha
Helix 11
11
B
54 66Right-handed alpha
Helix 12
12
B
79 81Right-handed 310
Helix 13
13
B
82 87Right-handed alpha
Helix 14
14
B
88 92Right-handed 310
Helix 15
15
B
117 129Right-handed alpha
Helix 16
16
B
153 160Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4POO.

There are 14 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 77first strand
Strand 2
A
47 52parallel
Strand 3
A
23 26parallel
Strand 4
A
95 101parallel
Strand 5
A
130 140parallel
Strand 6
A
182 188anti-parallel
Strand 7
A
166 173anti-parallel
Strand 8
B
166 173anti-parallel
Strand 9
B
182 188anti-parallel
Strand 10
B
130 140anti-parallel
Strand 11
B
95 101parallel
Strand 12
B
23 26parallel
Strand 13
B
47 52parallel
Strand 14
B
73 77parallel
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