Analysis of interatomic Contacts of Structural Units in PDB entry:
4PWZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4PWZ entry

There are 2 chains in PDB entry 4PWZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 23LEU 430
B
 MSE 1LEU 430
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4PWZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
53 65Right-handed alpha
Helix 2
2
A
72 76Right-handed 310
Helix 3
3
A
82 86Right-handed 310
Helix 4
4
A
87 93Right-handed alpha
Helix 5
5
A
137 139Right-handed 310
Helix 6
6
A
140 158Right-handed alpha
Helix 7
7
B
53 65Right-handed alpha
Helix 8
8
B
72 76Right-handed 310
Helix 9
9
B
82 86Right-handed 310
Helix 10
10
B
87 93Right-handed alpha
Helix 11
11
B
137 139Right-handed 310
Helix 12
12
B
140 158Right-handed alpha
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There are 16 sheets in PDB entry 4PWZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 29first strand
Strand 2
A
411 413anti-parallel
Strand 3
A
398 405anti-parallel
Strand 4
A
388 395anti-parallel
Strand 5
A
375 382anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 44first strand
Strand 2
A
98 106parallel
Strand 3
A
35 39parallel
Strand 4
A
68 70parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 44first strand
Strand 2
A
98 106parallel
Strand 3
A
112 120anti-parallel
Strand 4
A
127 136anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 198first strand
Strand 2
A
180 186anti-parallel
Strand 3
A
166 172anti-parallel
Strand 4
A
420 426anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 207first strand
Strand 2
A
213 218anti-parallel
Strand 3
A
224 230anti-parallel
Strand 4
A
236 242anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 251first strand
Strand 2
A
257 262anti-parallel
Strand 3
A
269 274anti-parallel
Strand 4
A
280 282anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
290 295first strand
Strand 2
A
301 306anti-parallel
Strand 3
A
313 318anti-parallel
Strand 4
A
325 326anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
333 339first strand
Strand 2
A
345 351anti-parallel
Strand 3
A
357 362anti-parallel
Strand 4
A
368 370anti-parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 29first strand
Strand 2
B
411 413anti-parallel
Strand 3
B
398 405anti-parallel
Strand 4
B
388 395anti-parallel
Strand 5
B
378 382anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 44first strand
Strand 2
B
98 106parallel
Strand 3
B
35 39parallel
Strand 4
B
68 70parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 44first strand
Strand 2
B
98 106parallel
Strand 3
B
112 120anti-parallel
Strand 4
B
127 136anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
193 198first strand
Strand 2
B
180 186anti-parallel
Strand 3
B
166 172anti-parallel
Strand 4
B
420 426anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
202 207first strand
Strand 2
B
213 218anti-parallel
Strand 3
B
224 230anti-parallel
Strand 4
B
236 242anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
247 251first strand
Strand 2
B
257 262anti-parallel
Strand 3
B
269 274anti-parallel
Strand 4
B
280 282anti-parallel
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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
290 295first strand
Strand 2
B
301 306anti-parallel
Strand 3
B
313 318anti-parallel
Strand 4
B
325 326anti-parallel
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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
334 339first strand
Strand 2
B
345 350anti-parallel
Strand 3
B
357 362anti-parallel
Strand 4
B
368 370anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il