Analysis of interatomic Contacts of Structural Units in PDB entry:
4PZ0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4PZ0 entry

There is 1 chain in PDB entry 4PZ0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 27PHE 347
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 4PZ0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
30 33Right-handed 310
Helix 2
2
A
45 63Right-handed alpha
Helix 3
3
A
75 89Right-handed alpha
Helix 4
4
A
104 114Right-handed alpha
Helix 5
5
A
126 130Right-handed 310
Helix 6
6
A
138 155Right-handed alpha
Helix 7
7
A
169 187Right-handed alpha
Helix 8
8
A
201 216Right-handed alpha
Helix 9
9
A
228 240Right-handed alpha
Helix 10
10
A
253 263Right-handed alpha
Helix 11
11
A
273 290Right-handed alpha
Helix 12
12
A
313 318Right-handed 310
Helix 13
13
A
341 345Right-handed 310
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There are 3 sheets in PDB entry 4PZ0. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 68first strand
Strand 2
A
35 39parallel
Strand 3
A
93 96parallel
Strand 4
A
117 121parallel
Strand 5
A
132 135parallel
Strand 6
A
327 330parallel
Strand 7
A
307 312anti-parallel
Strand 8
A
300 303anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
190 197first strand
Strand 2
A
158 164parallel
Strand 3
A
221 224parallel
Strand 4
A
247 250parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 271first strand
Strand 2
A
335 337anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il