Analysis of interatomic Contacts of Structural Units in PDB entry:
4Q0Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Q0Z entry

There are 8 chains in PDB entry 4Q0Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2ILE 983
B
 GLY 2ILE 983
C
 DT 0 DT 16
D
 DT 0 DT 16
E
 GLY 2ILE 983
F
 GLY 2ILE 983
G
 DT 0 DT 16
H
 DT 0 DT 16
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 71 helices in PDB entry 4Q0Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 11Right-handed alpha
Helix 2
2
A
12 14Right-handed 310
Helix 3
3
A
20 23Right-handed 310
Helix 4
4
A
33 42Right-handed alpha
Helix 5
5
A
52 68Right-handed alpha
Helix 6
6
A
81 97Right-handed alpha
Helix 7
7
A
768 782Right-handed alpha
Helix 8
8
A
792 803Right-handed alpha
Helix 9
9
A
814 819Right-handed alpha
Helix 10
10
A
839 848Right-handed alpha
Helix 11
11
A
850 862Right-handed alpha
Helix 12
12
A
873 885Right-handed alpha
Helix 13
13
A
886 897Right-handed alpha
Helix 14
14
A
908 921Right-handed alpha
Helix 15
15
A
931 940Right-handed alpha
Helix 16
16
A
956 969Right-handed alpha
Helix 17
17
A
971 983Right-handed alpha
Helix 18
18
B
5 11Right-handed alpha
Helix 19
19
B
12 14Right-handed 310
Helix 20
20
B
20 23Right-handed 310
Helix 21
21
B
33 42Right-handed alpha
Helix 22
22
B
52 68Right-handed alpha
Helix 23
23
B
81 89Right-handed alpha
Helix 24
24
B
768 782Right-handed alpha
Helix 25
25
B
792 803Right-handed alpha
Helix 26
26
B
814 819Right-handed alpha
Helix 27
27
B
839 848Right-handed alpha
Helix 28
28
B
850 862Right-handed alpha
Helix 29
29
B
873 885Right-handed alpha
Helix 30
30
B
886 900Right-handed alpha
Helix 31
31
B
900 906Right-handed alpha
Helix 32
32
B
908 921Right-handed alpha
Helix 33
33
B
931 940Right-handed alpha
Helix 34
34
B
956 969Right-handed alpha
Helix 35
35
B
971 980Right-handed alpha
Helix 36
36
B
981 983Right-handed 310
Helix 37
37
E
5 11Right-handed alpha
Helix 38
38
E
12 14Right-handed 310
Helix 39
39
E
18 23Right-handed 310
Helix 40
40
E
33 42Right-handed alpha
Helix 41
41
E
52 68Right-handed alpha
Helix 42
42
E
81 92Right-handed alpha
Helix 43
43
E
768 783Right-handed alpha
Helix 44
44
E
792 803Right-handed alpha
Helix 45
45
E
814 819Right-handed alpha
Helix 46
46
E
839 848Right-handed alpha
Helix 47
47
E
850 862Right-handed alpha
Helix 48
48
E
873 885Right-handed alpha
Helix 49
49
E
886 898Right-handed alpha
Helix 50
50
E
908 921Right-handed alpha
Helix 51
51
E
931 940Right-handed alpha
Helix 52
52
E
956 969Right-handed alpha
Helix 53
53
E
971 980Right-handed alpha
Helix 54
54
F
5 11Right-handed alpha
Helix 55
55
F
12 14Right-handed 310
Helix 56
56
F
18 23Right-handed 310
Helix 57
57
F
33 42Right-handed alpha
Helix 58
58
F
52 68Right-handed alpha
Helix 59
59
F
81 94Right-handed alpha
Helix 60
60
F
768 783Right-handed alpha
Helix 61
61
F
792 803Right-handed alpha
Helix 62
62
F
814 819Right-handed alpha
Helix 63
63
F
839 848Right-handed alpha
Helix 64
64
F
850 862Right-handed alpha
Helix 65
65
F
873 885Right-handed alpha
Helix 66
66
F
886 900Right-handed alpha
Helix 67
67
F
901 907Right-handed 310
Helix 68
68
F
908 921Right-handed alpha
Helix 69
69
F
931 940Right-handed alpha
Helix 70
70
F
956 969Right-handed alpha
Helix 71
71
F
971 983Right-handed alpha
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There are 4 sheets in PDB entry 4Q0Z. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 18first strand
Strand 2
A
834 838anti-parallel
Strand 3
A
824 826anti-parallel
Strand 4
A
808 810parallel
Strand 5
A
26 30parallel
Strand 6
A
71 76parallel
Strand 7
A
786 788parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 18first strand
Strand 2
B
834 838anti-parallel
Strand 3
B
824 826anti-parallel
Strand 4
B
808 810parallel
Strand 5
B
26 30parallel
Strand 6
B
71 76parallel
Strand 7
B
786 788parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
15 16first strand
Strand 2
E
836 838anti-parallel
Strand 3
E
824 826anti-parallel
Strand 4
E
808 810parallel
Strand 5
E
26 30parallel
Strand 6
E
71 76parallel
Strand 7
E
786 788parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
786 788first strand
Strand 2
F
71 76parallel
Strand 3
F
26 30parallel
Strand 4
F
808 810parallel
Strand 5
F
824 826parallel
Strand 6
F
836 838anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il