Analysis of interatomic Contacts of Structural Units in PDB entry:
4Q32


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Q32 entry

There are 4 chains in PDB entry 4Q32 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 6SER 357
B
 ILE 4SER 357
C
 ILE 4SER 357
D
 ILE 4GLU 352
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 4Q32. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 12Right-handed 310
Helix 2
2
A
54 65Right-handed alpha
Helix 3
3
A
75 89Right-handed alpha
Helix 4
4
A
103 114Right-handed alpha
Helix 5
5
A
128 142Right-handed alpha
Helix 6
6
A
154 163Right-handed alpha
Helix 7
7
A
180 185Right-handed alpha
Helix 8
8
A
190 206Right-handed alpha
Helix 9
9
A
217 228Right-handed alpha
Helix 10
10
A
264 269Right-handed alpha
Helix 11
11
A
298 317Right-handed alpha
Helix 12
12
A
321 329Right-handed alpha
Helix 13
13
A
335 343Right-handed alpha
Helix 14
14
B
54 64Right-handed alpha
Helix 15
15
B
75 89Right-handed alpha
Helix 16
16
B
103 114Right-handed alpha
Helix 17
17
B
128 142Right-handed alpha
Helix 18
18
B
154 165Right-handed alpha
Helix 19
19
B
180 185Right-handed alpha
Helix 20
20
B
190 206Right-handed alpha
Helix 21
21
B
217 227Right-handed alpha
Helix 22
22
B
235 240Right-handed alpha
Helix 23
23
B
264 271Right-handed alpha
Helix 24
24
B
298 317Right-handed alpha
Helix 25
25
B
321 328Right-handed alpha
Helix 26
26
B
335 343Right-handed alpha
Helix 27
27
C
10 12Right-handed 310
Helix 28
28
C
54 64Right-handed alpha
Helix 29
29
C
75 90Right-handed alpha
Helix 30
30
C
103 114Right-handed alpha
Helix 31
31
C
128 140Right-handed alpha
Helix 32
32
C
154 165Right-handed alpha
Helix 33
33
C
180 185Right-handed alpha
Helix 34
34
C
190 206Right-handed alpha
Helix 35
35
C
217 228Right-handed alpha
Helix 36
36
C
235 240Right-handed alpha
Helix 37
37
C
264 269Right-handed alpha
Helix 38
38
C
298 317Right-handed alpha
Helix 39
39
C
321 328Right-handed alpha
Helix 40
40
C
335 343Right-handed alpha
Helix 41
41
D
10 12Right-handed 310
Helix 42
42
D
24 28Right-handed 310
Helix 43
43
D
54 65Right-handed alpha
Helix 44
44
D
75 88Right-handed alpha
Helix 45
45
D
103 114Right-handed alpha
Helix 46
46
D
128 142Right-handed alpha
Helix 47
47
D
154 165Right-handed alpha
Helix 48
48
D
180 185Right-handed alpha
Helix 49
49
D
190 206Right-handed alpha
Helix 50
50
D
217 227Right-handed alpha
Helix 51
51
D
235 240Right-handed alpha
Helix 52
52
D
298 317Right-handed alpha
Helix 53
53
D
321 328Right-handed alpha
Helix 54
54
D
335 343Right-handed alpha
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There are 16 sheets in PDB entry 4Q32. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 8first strand
Strand 2
C
330 334parallel
Strand 3
C
14 17anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 16first strand
Strand 2
A
331 333anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 33first strand
Strand 2
A
39 40anti-parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 46first strand
Strand 2
A
67 70parallel
Strand 3
A
95 98parallel
Strand 4
A
118 122parallel
Strand 5
A
146 152parallel
Strand 6
A
168 171parallel
Strand 7
A
209 212parallel
Strand 8
A
231 234parallel
Strand 9
A
44 46parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
249 251first strand
Strand 2
A
254 260anti-parallel
Strand 3
A
290 294anti-parallel
Strand 4
C
348 349anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 351first strand
Strand 2
B
290 294anti-parallel
Strand 3
B
254 260anti-parallel
Strand 4
B
249 251anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
14 16first strand
Strand 2
B
331 333anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 33first strand
Strand 2
B
39 40anti-parallel
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There are 9 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 46first strand
Strand 2
B
67 70parallel
Strand 3
B
95 98parallel
Strand 4
B
118 122parallel
Strand 5
B
146 152parallel
Strand 6
B
168 171parallel
Strand 7
B
209 212parallel
Strand 8
B
231 234parallel
Strand 9
B
44 46parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
348 349first strand
Strand 2
D
290 294anti-parallel
Strand 3
D
254 260anti-parallel
Strand 4
D
248 251anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
32 33first strand
Strand 2
C
39 40anti-parallel
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There are 9 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
44 46first strand
Strand 2
C
67 70parallel
Strand 3
C
95 98parallel
Strand 4
C
118 121parallel
Strand 5
C
146 152parallel
Strand 6
C
168 171parallel
Strand 7
C
209 212parallel
Strand 8
C
231 234parallel
Strand 9
C
44 46parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
248 251first strand
Strand 2
C
254 260anti-parallel
Strand 3
C
290 294anti-parallel
Strand 4
D
348 351anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
14 16first strand
Strand 2
D
331 333anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
32 33first strand
Strand 2
D
39 40anti-parallel
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There are 9 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
44 46first strand
Strand 2
D
67 70parallel
Strand 3
D
95 98parallel
Strand 4
D
118 122parallel
Strand 5
D
146 152parallel
Strand 6
D
168 171parallel
Strand 7
D
209 212parallel
Strand 8
D
231 234parallel
Strand 9
D
44 46parallel
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