Analysis of interatomic Contacts of Structural Units in PDB entry:
4Q52


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Q52 entry

There are 4 chains in PDB entry 4Q52 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 23TYR 197
B
 GLN 22TYR 197
C
 ILE 23TYR 197
D
 ILE 23TYR 197
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 4Q52. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
31 39Right-handed alpha
Helix 2
2
A
64 67Right-handed 310
Helix 3
3
B
31 39Right-handed alpha
Helix 4
4
B
64 67Right-handed 310
Helix 5
5
C
31 39Right-handed alpha
Helix 6
6
C
64 67Right-handed 310
Helix 7
7
D
31 39Right-handed alpha
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There are 12 sheets in PDB entry 4Q52. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 62first strand
Strand 2
A
24 30anti-parallel
Strand 3
A
85 92parallel
Strand 4
A
145 157anti-parallel
Strand 5
A
123 134anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 52first strand
Strand 2
A
181 190parallel
Strand 3
A
162 176anti-parallel
Strand 4
A
193 196anti-parallel
Strand 5
A
76 78parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 52first strand
Strand 2
A
181 190parallel
Strand 3
A
162 176anti-parallel
Strand 4
A
100 108anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 62first strand
Strand 2
B
23 30anti-parallel
Strand 3
B
85 92parallel
Strand 4
B
145 157anti-parallel
Strand 5
B
123 134anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 52first strand
Strand 2
B
181 190parallel
Strand 3
B
162 176anti-parallel
Strand 4
B
193 196anti-parallel
Strand 5
B
76 78parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 52first strand
Strand 2
B
181 190parallel
Strand 3
B
162 176anti-parallel
Strand 4
B
100 108anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
58 62first strand
Strand 2
C
24 30anti-parallel
Strand 3
C
85 92parallel
Strand 4
C
145 157anti-parallel
Strand 5
C
123 134anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
51 52first strand
Strand 2
C
181 190parallel
Strand 3
C
162 176anti-parallel
Strand 4
C
193 196anti-parallel
Strand 5
C
76 78parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
51 52first strand
Strand 2
C
181 190parallel
Strand 3
C
162 176anti-parallel
Strand 4
C
100 108anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
58 61first strand
Strand 2
D
24 30anti-parallel
Strand 3
D
85 92parallel
Strand 4
D
145 157anti-parallel
Strand 5
D
123 134anti-parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
51 52first strand
Strand 2
D
181 190parallel
Strand 3
D
162 176anti-parallel
Strand 4
D
193 196anti-parallel
Strand 5
D
76 78parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
51 52first strand
Strand 2
D
181 190parallel
Strand 3
D
162 176anti-parallel
Strand 4
D
100 108anti-parallel
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