Analysis of interatomic Contacts of Structural Units in PDB entry:
4Q5R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Q5R entry

There are 6 chains in PDB entry 4Q5R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 3LEU 204
C
 PRO 3LEU 204
D
 ALA 2ASP 203
B
 PRO 3LEU 204
F
 PRO 3LEU 204
E
 TYR 5PRO 200
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 69 helices in PDB entry 4Q5R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 26Right-handed alpha
Helix 2
2
A
36 38Right-handed 310
Helix 3
3
A
39 44Right-handed alpha
Helix 4
4
A
45 47Right-handed 310
Helix 5
5
A
64 76Right-handed alpha
Helix 6
6
A
82 108Right-handed alpha
Helix 7
7
A
111 125Right-handed alpha
Helix 8
8
A
125 141Right-handed alpha
Helix 9
9
A
151 169Right-handed alpha
Helix 10
10
A
176 189Right-handed alpha
Helix 11
11
A
189 199Right-handed alpha
Helix 12
12
C
13 15Right-handed 310
Helix 13
13
C
16 26Right-handed alpha
Helix 14
14
C
36 38Right-handed 310
Helix 15
15
C
39 44Right-handed alpha
Helix 16
16
C
45 47Right-handed 310
Helix 17
17
C
64 76Right-handed alpha
Helix 18
18
C
82 108Right-handed alpha
Helix 19
19
C
111 118Right-handed alpha
Helix 20
20
C
118 125Right-handed alpha
Helix 21
21
C
125 141Right-handed alpha
Helix 22
22
C
151 169Right-handed alpha
Helix 23
23
C
176 188Right-handed alpha
Helix 24
24
C
189 199Right-handed alpha
Helix 25
25
D
16 26Right-handed alpha
Helix 26
26
D
36 38Right-handed 310
Helix 27
27
D
39 44Right-handed alpha
Helix 28
28
D
45 47Right-handed 310
Helix 29
29
D
64 76Right-handed alpha
Helix 30
30
D
82 108Right-handed alpha
Helix 31
31
D
111 125Right-handed alpha
Helix 32
32
D
125 141Right-handed alpha
Helix 33
33
D
151 169Right-handed alpha
Helix 34
34
D
176 188Right-handed alpha
Helix 35
35
D
189 199Right-handed alpha
Helix 36
36
B
13 15Right-handed 310
Helix 37
37
B
16 26Right-handed alpha
Helix 38
38
B
36 38Right-handed 310
Helix 39
39
B
39 44Right-handed alpha
Helix 40
40
B
45 47Right-handed 310
Helix 41
41
B
64 76Right-handed alpha
Helix 42
42
B
82 108Right-handed alpha
Helix 43
43
B
111 125Right-handed alpha
Helix 44
44
B
125 141Right-handed alpha
Helix 45
45
B
151 169Right-handed alpha
Helix 46
46
B
176 189Right-handed alpha
Helix 47
47
B
189 199Right-handed alpha
Helix 48
48
F
16 26Right-handed alpha
Helix 49
49
F
36 38Right-handed 310
Helix 50
50
F
39 44Right-handed alpha
Helix 51
51
F
45 47Right-handed 310
Helix 52
52
F
64 76Right-handed alpha
Helix 53
53
F
82 108Right-handed alpha
Helix 54
54
F
111 118Right-handed alpha
Helix 55
55
F
118 125Right-handed alpha
Helix 56
56
F
125 141Right-handed alpha
Helix 57
57
F
151 169Right-handed alpha
Helix 58
58
F
176 189Right-handed alpha
Helix 59
59
F
189 199Right-handed alpha
Helix 60
60
E
16 26Right-handed alpha
Helix 61
61
E
43 47Right-handed 310
Helix 62
62
E
64 76Right-handed alpha
Helix 63
63
E
82 108Right-handed alpha
Helix 64
64
E
111 117Right-handed alpha
Helix 65
65
E
118 125Right-handed alpha
Helix 66
66
E
125 141Right-handed alpha
Helix 67
67
E
151 169Right-handed alpha
Helix 68
68
E
176 187Right-handed alpha
Helix 69
69
E
189 199Right-handed alpha
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There are 6 sheets in PDB entry 4Q5R. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 34first strand
Strand 2
A
5 9parallel
Strand 3
A
54 57anti-parallel
Strand 4
A
60 63anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 34first strand
Strand 2
C
5 9parallel
Strand 3
C
54 57anti-parallel
Strand 4
C
60 63anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
30 33first strand
Strand 2
D
5 8parallel
Strand 3
D
54 57anti-parallel
Strand 4
D
60 63anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 34first strand
Strand 2
B
5 9parallel
Strand 3
B
54 57anti-parallel
Strand 4
B
60 63anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
31 34first strand
Strand 2
F
5 9parallel
Strand 3
F
54 57anti-parallel
Strand 4
F
60 63anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
31 33first strand
Strand 2
E
6 8parallel
Strand 3
E
54 57anti-parallel
Strand 4
E
60 63anti-parallel
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