Analysis of interatomic Contacts of Structural Units in PDB entry:
4Q69


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Q69 entry

There are 2 chains in PDB entry 4Q69 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 33LEU 488
B
 ALA 36LEU 488
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 4Q69. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
40 57Right-handed alpha
Helix 2
2
A
61 70Right-handed alpha
Helix 3
3
A
82 87Right-handed 310
Helix 4
4
A
90 103Right-handed alpha
Helix 5
5
A
105 119Right-handed alpha
Helix 6
6
A
123 146Right-handed alpha
Helix 7
7
A
165 184Right-handed alpha
Helix 8
8
A
202 222Right-handed alpha
Helix 9
9
A
225 227Right-handed 310
Helix 10
10
A
228 239Right-handed alpha
Helix 11
11
A
244 248Right-handed 310
Helix 12
12
A
261 269Right-handed alpha
Helix 13
13
A
280 290Right-handed alpha
Helix 14
14
A
294 299Right-handed alpha
Helix 15
15
A
330 335Right-handed 310
Helix 16
16
A
344 359Right-handed alpha
Helix 17
17
A
365 384Right-handed alpha
Helix 18
18
A
387 398Right-handed alpha
Helix 19
19
A
400 404Right-handed 310
Helix 20
20
A
405 421Right-handed alpha
Helix 21
21
A
424 435Right-handed alpha
Helix 22
22
A
463 470Right-handed alpha
Helix 23
23
B
40 57Right-handed alpha
Helix 24
24
B
61 70Right-handed alpha
Helix 25
25
B
82 87Right-handed 310
Helix 26
26
B
90 103Right-handed alpha
Helix 27
27
B
105 119Right-handed alpha
Helix 28
28
B
123 146Right-handed alpha
Helix 29
29
B
165 184Right-handed alpha
Helix 30
30
B
202 222Right-handed alpha
Helix 31
31
B
225 227Right-handed 310
Helix 32
32
B
228 239Right-handed alpha
Helix 33
33
B
244 248Right-handed 310
Helix 34
34
B
261 269Right-handed alpha
Helix 35
35
B
280 290Right-handed alpha
Helix 36
36
B
294 299Right-handed alpha
Helix 37
37
B
330 335Right-handed 310
Helix 38
38
B
344 359Right-handed alpha
Helix 39
39
B
365 384Right-handed alpha
Helix 40
40
B
387 398Right-handed alpha
Helix 41
41
B
400 404Right-handed 310
Helix 42
42
B
405 421Right-handed alpha
Helix 43
43
B
424 435Right-handed alpha
Helix 44
44
B
463 470Right-handed alpha
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There are 4 sheets in PDB entry 4Q69. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 73first strand
Strand 2
A
278 279anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
249 251first strand
Strand 2
A
340 343anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 73first strand
Strand 2
B
278 279anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
249 251first strand
Strand 2
B
340 343anti-parallel
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