Analysis of interatomic Contacts of Structural Units in PDB entry:
4Q6J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Q6J entry

There are 2 chains in PDB entry 4Q6J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2VAL 249
B
 ALA 0VAL 249
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 4Q6J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 14Right-handed alpha
Helix 2
2
A
49 52Right-handed 310
Helix 3
3
A
53 60Right-handed alpha
Helix 4
4
A
62 81Right-handed alpha
Helix 5
5
A
93 98Right-handed alpha
Helix 6
6
A
98 113Right-handed alpha
Helix 7
7
A
115 117Right-handed 310
Helix 8
8
A
132 144Right-handed alpha
Helix 9
9
A
159 167Right-handed alpha
Helix 10
10
A
176 180Right-handed 310
Helix 11
11
A
185 202Right-handed alpha
Helix 12
12
A
213 223Right-handed alpha
Helix 13
13
A
238 246Right-handed alpha
Helix 14
14
B
4 14Right-handed alpha
Helix 15
15
B
49 60Right-handed alpha
Helix 16
16
B
62 81Right-handed alpha
Helix 17
17
B
93 97Right-handed alpha
Helix 18
18
B
98 113Right-handed alpha
Helix 19
19
B
115 117Right-handed 310
Helix 20
20
B
132 144Right-handed alpha
Helix 21
21
B
159 167Right-handed alpha
Helix 22
22
B
175 180Right-handed 310
Helix 23
23
B
181 184Right-handed 310
Helix 24
24
B
185 202Right-handed alpha
Helix 25
25
B
213 223Right-handed alpha
Helix 26
26
B
238 246Right-handed alpha
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There are 2 sheets in PDB entry 4Q6J. Click on sheet of interest to get list of strands forming it: A, B,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 48first strand
Strand 2
A
32 42anti-parallel
Strand 3
A
86 92parallel
Strand 4
A
119 124parallel
Strand 5
A
148 154parallel
Strand 6
A
171 174parallel
Strand 7
A
205 208parallel
Strand 8
A
227 228parallel
Strand 9
A
17 26anti-parallel
Strand 10
A
32 42anti-parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 48first strand
Strand 2
B
32 42anti-parallel
Strand 3
B
86 92parallel
Strand 4
B
119 124parallel
Strand 5
B
148 151parallel
Strand 6
B
171 174parallel
Strand 7
B
205 208parallel
Strand 8
B
227 228parallel
Strand 9
B
17 26anti-parallel
Strand 10
B
32 42anti-parallel
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