Analysis of interatomic Contacts of Structural Units in PDB entry:
4Q6T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Q6T entry

There is 1 chain in PDB entry 4Q6T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 31LYS 367
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 4Q6T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
43 53Right-handed alpha
Helix 2
2
A
54 56Right-handed 310
Helix 3
3
A
79 92Right-handed alpha
Helix 4
4
A
111 120Right-handed alpha
Helix 5
5
A
121 140Right-handed alpha
Helix 6
6
A
152 154Right-handed 310
Helix 7
7
A
155 173Right-handed alpha
Helix 8
8
A
190 194Right-handed 310
Helix 9
9
A
197 205Right-handed alpha
Helix 10
10
A
225 227Right-handed 310
Helix 11
11
A
236 251Right-handed alpha
Helix 12
12
A
252 254Right-handed 310
Helix 13
13
A
277 286Right-handed alpha
Helix 14
14
A
315 319Right-handed 310
Helix 15
15
A
327 341Right-handed alpha
Helix 16
16
A
355 367Right-handed alpha
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There are 5 sheets in PDB entry 4Q6T. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 74first strand
Strand 2
A
58 67anti-parallel
Strand 3
A
96 101parallel
Strand 4
A
143 147parallel
Strand 5
A
176 181parallel
Strand 6
A
207 210parallel
Strand 7
A
256 261parallel
Strand 8
A
345 351parallel
Strand 9
A
33 39parallel
Strand 10
A
58 67parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 104first strand
Strand 2
A
109 110anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 217first strand
Strand 2
A
220 221anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 230first strand
Strand 2
A
308 309anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
271 274first strand
Strand 2
A
263 266anti-parallel
Strand 3
A
322 324anti-parallel
Strand 4
A
297 301anti-parallel
Strand 5
A
288 292anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il