Analysis of interatomic Contacts of Structural Units in PDB entry:
4Q72


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Q72 entry

There are 2 chains in PDB entry 4Q72 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2GLY 989
B
 PRO 2ALA 383
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 96 helices in PDB entry 4Q72. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 27Right-handed alpha
Helix 2
2
A
30 49Right-handed alpha
Helix 3
3
A
57 66Right-handed alpha
Helix 4
4
A
68 84Right-handed alpha
Helix 5
5
A
87 98Right-handed alpha
Helix 6
6
A
103 115Right-handed alpha
Helix 7
7
A
116 121Right-handed 310
Helix 8
8
A
137 148Right-handed alpha
Helix 9
9
A
148 167Right-handed alpha
Helix 10
10
A
172 180Right-handed alpha
Helix 11
11
A
201 222Right-handed alpha
Helix 12
12
A
237 241Right-handed 310
Helix 13
13
A
246 248Right-handed 310
Helix 14
14
A
249 270Right-handed alpha
Helix 15
15
A
281 283Right-handed 310
Helix 16
16
A
284 297Right-handed alpha
Helix 17
17
A
298 302Right-handed 310
Helix 18
18
A
317 332Right-handed alpha
Helix 19
19
A
345 356Right-handed alpha
Helix 20
20
A
366 383Right-handed alpha
Helix 21
21
A
396 408Right-handed alpha
Helix 22
22
A
422 433Right-handed alpha
Helix 23
23
A
449 463Right-handed alpha
Helix 24
24
A
466 472Right-handed alpha
Helix 25
25
A
477 482Right-handed alpha
Helix 26
26
A
484 490Right-handed alpha
Helix 27
27
A
491 495Right-handed 310
Helix 28
28
A
502 506Right-handed 310
Helix 29
29
A
521 534Right-handed alpha
Helix 30
30
A
546 567Right-handed alpha
Helix 31
31
A
568 586Right-handed alpha
Helix 32
32
A
586 597Right-handed alpha
Helix 33
33
A
601 628Right-handed alpha
Helix 34
34
A
661 674Right-handed alpha
Helix 35
35
A
686 701Right-handed alpha
Helix 36
36
A
713 723Right-handed alpha
Helix 37
37
A
734 748Right-handed alpha
Helix 38
38
A
772 786Right-handed alpha
Helix 39
39
A
787 790Right-handed 310
Helix 40
40
A
802 818Right-handed alpha
Helix 41
41
A
836 854Right-handed alpha
Helix 42
42
A
877 881Right-handed 310
Helix 43
43
A
896 898Right-handed 310
Helix 44
44
A
899 910Right-handed alpha
Helix 45
45
A
922 933Right-handed alpha
Helix 46
46
A
957 961Right-handed 310
Helix 47
47
A
971 974Right-handed 310
Helix 48
48
B
15 27Right-handed alpha
Helix 49
49
B
30 49Right-handed alpha
Helix 50
50
B
57 65Right-handed alpha
Helix 51
51
B
68 84Right-handed alpha
Helix 52
52
B
87 98Right-handed alpha
Helix 53
53
B
103 114Right-handed alpha
Helix 54
54
B
115 116Right-handed 310
Helix 55
55
B
117 121Right-handed 310
Helix 56
56
B
137 148Right-handed alpha
Helix 57
57
B
148 167Right-handed alpha
Helix 58
58
B
172 180Right-handed alpha
Helix 59
59
B
201 222Right-handed alpha
Helix 60
60
B
237 241Right-handed 310
Helix 61
61
B
246 248Right-handed 310
Helix 62
62
B
249 270Right-handed alpha
Helix 63
63
B
281 283Right-handed 310
Helix 64
64
B
284 298Right-handed alpha
Helix 65
65
B
299 302Right-handed 310
Helix 66
66
B
317 333Right-handed alpha
Helix 67
67
B
345 356Right-handed alpha
Helix 68
68
B
366 383Right-handed alpha
Helix 69
69
B
396 408Right-handed alpha
Helix 70
70
B
422 433Right-handed alpha
Helix 71
71
B
449 463Right-handed alpha
Helix 72
72
B
466 472Right-handed alpha
Helix 73
73
B
477 482Right-handed alpha
Helix 74
74
B
484 490Right-handed alpha
Helix 75
75
B
491 495Right-handed 310
Helix 76
76
B
502 506Right-handed 310
Helix 77
77
B
521 534Right-handed alpha
Helix 78
78
B
546 567Right-handed alpha
Helix 79
79
B
568 586Right-handed alpha
Helix 80
80
B
586 597Right-handed alpha
Helix 81
81
B
601 628Right-handed alpha
Helix 82
82
B
661 674Right-handed alpha
Helix 83
83
B
686 701Right-handed alpha
Helix 84
84
B
703 705Right-handed 310
Helix 85
85
B
713 723Right-handed alpha
Helix 86
86
B
734 748Right-handed alpha
Helix 87
87
B
772 786Right-handed alpha
Helix 88
88
B
787 790Right-handed 310
Helix 89
89
B
802 818Right-handed alpha
Helix 90
90
B
836 854Right-handed alpha
Helix 91
91
B
877 881Right-handed 310
Helix 92
92
B
896 898Right-handed 310
Helix 93
93
B
899 910Right-handed alpha
Helix 94
94
B
922 933Right-handed alpha
Helix 95
95
B
957 961Right-handed 310
Helix 96
96
B
971 974Right-handed 310
Back to top of page

There are 6 sheets in PDB entry 4Q72. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 170first strand
Strand 2
A
438 446parallel
Strand 3
A
414 418parallel
Strand 4
A
388 393parallel
Strand 5
A
336 341parallel
Strand 6
A
307 312parallel
Strand 7
A
274 277parallel
Strand 8
A
233 236parallel
Strand 9
A
191 194parallel
Strand 10
A
438 446parallel
Back to list of sheets
Back to top of page

There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
631 632first strand
Strand 2
A
639 647anti-parallel
Strand 3
A
976 984anti-parallel
Strand 4
B
937 940parallel
Strand 5
B
915 919parallel
Strand 6
B
763 767parallel
Strand 7
B
795 801parallel
Strand 8
B
889 895parallel
Strand 9
B
871 874parallel
Strand 10
B
855 859anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
707 709first strand
Strand 2
A
677 681parallel
Strand 3
A
650 654parallel
Strand 4
A
728 732parallel
Strand 5
A
755 758parallel
Back to list of sheets
Back to top of page

There are 10 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
855 859first strand
Strand 2
A
871 874anti-parallel
Strand 3
A
889 895parallel
Strand 4
A
795 801parallel
Strand 5
A
763 767parallel
Strand 6
A
915 919parallel
Strand 7
A
937 940parallel
Strand 8
B
976 984parallel
Strand 9
B
639 647anti-parallel
Strand 10
B
631 632anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
168 170first strand
Strand 2
B
438 446parallel
Strand 3
B
414 418parallel
Strand 4
B
388 393parallel
Strand 5
B
336 341parallel
Strand 6
B
307 312parallel
Strand 7
B
274 277parallel
Strand 8
B
233 236parallel
Strand 9
B
191 194parallel
Strand 10
B
438 446parallel
Back to list of sheets
Back to top of page

There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
707 709first strand
Strand 2
B
677 681parallel
Strand 3
B
650 654parallel
Strand 4
B
726 732parallel
Strand 5
B
755 758parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il