Analysis of interatomic Contacts of Structural Units in PDB entry:
4Q7I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Q7I entry

There are 2 chains in PDB entry 4Q7I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 298
B
 MET 1ALA 290
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 25 helices in PDB entry 4Q7I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 29Right-handed alpha
Helix 2
2
A
38 42Right-handed alpha
Helix 3
3
A
45 60Right-handed alpha
Helix 4
4
A
70 74Right-handed 310
Helix 5
5
A
79 100Right-handed alpha
Helix 6
6
A
124 146Right-handed alpha
Helix 7
7
A
164 176Right-handed alpha
Helix 8
8
A
186 193Right-handed alpha
Helix 9
9
A
195 203Right-handed alpha
Helix 10
10
A
226 237Right-handed alpha
Helix 11
11
A
253 259Right-handed alpha
Helix 12
12
A
270 290Right-handed alpha
Helix 13
13
A
292 298Right-handed 310
Helix 14
14
B
18 29Right-handed alpha
Helix 15
15
B
38 42Right-handed alpha
Helix 16
16
B
45 60Right-handed alpha
Helix 17
17
B
70 74Right-handed 310
Helix 18
18
B
79 101Right-handed alpha
Helix 19
19
B
124 146Right-handed alpha
Helix 20
20
B
164 176Right-handed alpha
Helix 21
21
B
186 193Right-handed alpha
Helix 22
22
B
195 203Right-handed alpha
Helix 23
23
B
226 237Right-handed alpha
Helix 24
24
B
253 259Right-handed alpha
Helix 25
25
B
270 290Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 4Q7I. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 7first strand
Strand 2
A
33 37parallel
Strand 3
A
62 69parallel
Strand 4
A
104 112parallel
Strand 5
A
148 152parallel
Strand 6
A
180 185parallel
Strand 7
A
207 212parallel
Strand 8
A
243 245parallel
Strand 9
A
4 7parallel
Back to list of sheets
Back to top of page

There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 7first strand
Strand 2
B
33 37parallel
Strand 3
B
62 69parallel
Strand 4
B
104 112parallel
Strand 5
B
148 152parallel
Strand 6
B
180 185parallel
Strand 7
B
207 212parallel
Strand 8
B
243 245parallel
Strand 9
B
4 7parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il