Analysis of interatomic Contacts of Structural Units in PDB entry:
4Q7K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Q7K entry

There is 1 chain in PDB entry 4Q7K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 353GLY 570
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 4Q7K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
377 382Right-handed alpha
Helix 2
2
A
423 428Right-handed alpha
Helix 3
3
A
435 446Right-handed alpha
Helix 4
4
A
448 455Right-handed alpha
Helix 5
5
A
457 460Right-handed 310
Helix 6
6
A
464 468Right-handed 310
Helix 7
7
A
471 486Right-handed alpha
Helix 8
8
A
501 516Right-handed alpha
Helix 9
9
A
527 532Right-handed alpha
Helix 10
10
A
550 558Right-handed alpha
Helix 11
11
A
558 569Right-handed alpha
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There are 2 sheets in PDB entry 4Q7K. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
409 412first strand
Strand 2
A
490 494parallel
Strand 3
A
520 524parallel
Strand 4
A
361 365parallel
Strand 5
A
536 540parallel
Strand 6
A
545 549anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
421 422first strand
Strand 2
A
462 463anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il