Analysis of interatomic Contacts of Structural Units in PDB entry:
4Q7L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Q7L entry

There are 3 chains in PDB entry 4Q7L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 352GLN 606
B
 SER 352PHE 605
C
 SER 352LEU 593
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 4Q7L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
393 402Right-handed alpha
Helix 2
2
A
420 422Right-handed 310
Helix 3
3
A
423 429Right-handed alpha
Helix 4
4
A
444 451Right-handed alpha
Helix 5
5
A
457 468Right-handed alpha
Helix 6
6
A
470 477Right-handed alpha
Helix 7
7
A
479 483Right-handed 310
Helix 8
8
A
485 490Right-handed alpha
Helix 9
9
A
493 509Right-handed alpha
Helix 10
10
A
523 539Right-handed alpha
Helix 11
11
A
549 556Right-handed alpha
Helix 12
12
A
572 577Right-handed alpha
Helix 13
13
A
581 588Right-handed alpha
Helix 14
14
A
601 605Right-handed 310
Helix 15
15
B
393 402Right-handed alpha
Helix 16
16
B
420 422Right-handed 310
Helix 17
17
B
423 430Right-handed alpha
Helix 18
18
B
444 451Right-handed alpha
Helix 19
19
B
457 468Right-handed alpha
Helix 20
20
B
470 476Right-handed alpha
Helix 21
21
B
479 483Right-handed 310
Helix 22
22
B
485 489Right-handed 310
Helix 23
23
B
493 509Right-handed alpha
Helix 24
24
B
524 539Right-handed alpha
Helix 25
25
B
549 555Right-handed alpha
Helix 26
26
B
572 580Right-handed alpha
Helix 27
27
B
581 589Right-handed alpha
Helix 28
28
C
393 402Right-handed alpha
Helix 29
29
C
420 422Right-handed 310
Helix 30
30
C
423 430Right-handed alpha
Helix 31
31
C
444 451Right-handed alpha
Helix 32
32
C
457 468Right-handed alpha
Helix 33
33
C
470 476Right-handed alpha
Helix 34
34
C
479 483Right-handed 310
Helix 35
35
C
493 509Right-handed alpha
Helix 36
36
C
525 539Right-handed alpha
Helix 37
37
C
549 555Right-handed alpha
Helix 38
38
C
572 579Right-handed alpha
Helix 39
39
C
581 591Right-handed alpha
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There are 6 sheets in PDB entry 4Q7L. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
371 378first strand
Strand 2
A
355 362anti-parallel
Strand 3
A
409 414anti-parallel
Strand 4
A
417 418anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 434first strand
Strand 2
A
512 516parallel
Strand 3
A
542 546parallel
Strand 4
A
383 387parallel
Strand 5
A
558 563parallel
Strand 6
A
566 571anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
371 378first strand
Strand 2
B
355 362anti-parallel
Strand 3
B
409 414anti-parallel
Strand 4
B
417 418anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
431 434first strand
Strand 2
B
512 516parallel
Strand 3
B
542 546parallel
Strand 4
B
383 387parallel
Strand 5
B
558 563parallel
Strand 6
B
566 571anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
371 378first strand
Strand 2
C
355 362anti-parallel
Strand 3
C
409 414anti-parallel
Strand 4
C
417 418anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
431 434first strand
Strand 2
C
512 516parallel
Strand 3
C
542 546parallel
Strand 4
C
383 387parallel
Strand 5
C
558 563parallel
Strand 6
C
566 571anti-parallel
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