Analysis of interatomic Contacts of Structural Units in PDB entry:
4Q8G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Q8G entry

There are 2 chains in PDB entry 4Q8G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 461PHE 863
B
 GLU 460VAL 809
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 4Q8G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
476 480Right-handed 310
Helix 2
2
A
496 500Right-handed 310
Helix 3
3
A
515 525Right-handed alpha
Helix 4
4
A
526 537Right-handed alpha
Helix 5
5
A
545 560Right-handed alpha
Helix 6
6
A
567 577Right-handed alpha
Helix 7
7
A
617 637Right-handed alpha
Helix 8
8
A
642 649Right-handed alpha
Helix 9
9
A
695 703Right-handed alpha
Helix 10
10
A
742 752Right-handed alpha
Helix 11
11
A
774 778Right-handed 310
Helix 12
12
A
833 839Right-handed alpha
Helix 13
13
A
856 860Right-handed 310
Helix 14
14
B
476 480Right-handed 310
Helix 15
15
B
487 491Right-handed 310
Helix 16
16
B
496 500Right-handed 310
Helix 17
17
B
515 525Right-handed alpha
Helix 18
18
B
526 536Right-handed alpha
Helix 19
19
B
545 561Right-handed alpha
Helix 20
20
B
567 578Right-handed alpha
Helix 21
21
B
617 638Right-handed alpha
Helix 22
22
B
642 649Right-handed alpha
Helix 23
23
B
695 703Right-handed alpha
Helix 24
24
B
742 751Right-handed alpha
Helix 25
25
B
774 778Right-handed 310
Helix 26
26
B
833 838Right-handed alpha
Helix 27
27
B
856 860Right-handed 310
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There are 5 sheets in PDB entry 4Q8G. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
666 670first strand
Strand 2
A
650 657anti-parallel
Strand 3
A
719 728anti-parallel
Strand 4
A
704 712anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
768 772first strand
Strand 2
A
759 765anti-parallel
Strand 3
A
783 797anti-parallel
Strand 4
B
783 797anti-parallel
Strand 5
B
845 854anti-parallel
Strand 6
B
734 739anti-parallel
Strand 7
B
673 675parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
673 675first strand
Strand 2
A
734 739parallel
Strand 3
A
845 854anti-parallel
Strand 4
A
783 797anti-parallel
Strand 5
A
803 813anti-parallel
Strand 6
A
818 825anti-parallel
Strand 7
A
828 832anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
769 772first strand
Strand 2
B
759 764anti-parallel
Strand 3
B
783 797anti-parallel
Strand 4
B
803 813anti-parallel
Strand 5
B
818 825anti-parallel
Strand 6
B
828 832anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
666 670first strand
Strand 2
B
650 657anti-parallel
Strand 3
B
719 728anti-parallel
Strand 4
B
704 712anti-parallel
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