Analysis of interatomic Contacts of Structural Units in PDB entry:
4QEG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4QEG entry

There is 1 chain in PDB entry 4QEG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 2833THR 2921
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 4QEG. Click on helix number for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
2898 2902Right-handed 310
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There are 2 sheets in PDB entry 4QEG. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2838 2840first strand
Strand 2
A
2853 2859anti-parallel
Strand 3
A
2889 2894anti-parallel
Strand 4
A
2881 2886anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2845 2847first strand
Strand 2
A
2912 2920parallel
Strand 3
A
2903 2909anti-parallel
Strand 4
A
2867 2870anti-parallel
Strand 5
A
2873 2874anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il