Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 4QKV entry
There are 3 chains in PDB entry 4QKV
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
A
|
ILE 46 | GLU 146 |
B
|
ASN 52 | GLU 144 |
C
|
GLY 53 | ASN 143 |
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There are 4
helices in PDB entry 4QKV. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
| Helix 1 |
1 | A
| 48 |
117 | Right-handed alpha |
| Helix 2 |
2 | A
| 118 |
145 | Right-handed alpha |
| Helix 3 |
3 | B
| 53 |
141 | Right-handed alpha |
| Helix 4 |
4 | C
| 54 |
141 | Right-handed alpha |
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There are no sheets in PDB entry
4QKV
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il