Analysis of interatomic Contacts of Structural Units in PDB entry:
4QMI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4QMI entry

There are 2 chains in PDB entry 4QMI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 853MET 1080
B
 PRO 853LYS 1077
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 4QMI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
857 861Right-handed 310
Helix 2
2
A
862 870Right-handed alpha
Helix 3
3
A
873 892Right-handed alpha
Helix 4
4
A
900 907Right-handed alpha
Helix 5
5
A
913 932Right-handed alpha
Helix 6
6
A
933 939Right-handed 310
Helix 7
7
A
942 949Right-handed alpha
Helix 8
8
A
950 952Right-handed 310
Helix 9
9
A
954 973Right-handed alpha
Helix 10
10
A
974 979Right-handed alpha
Helix 11
11
A
981 988Right-handed alpha
Helix 12
12
A
991 1006Right-handed alpha
Helix 13
13
A
1007 1009Right-handed 310
Helix 14
14
A
1015 1018Right-handed 310
Helix 15
15
A
1019 1028Right-handed alpha
Helix 16
16
A
1031 1050Right-handed alpha
Helix 17
17
A
1050 1057Right-handed alpha
Helix 18
18
A
1058 1061Right-handed 310
Helix 19
19
A
1062 1077Right-handed alpha
Helix 20
20
A
1078 1080Right-handed 310
Helix 21
21
B
857 861Right-handed 310
Helix 22
22
B
862 870Right-handed alpha
Helix 23
23
B
873 892Right-handed alpha
Helix 24
24
B
900 909Right-handed alpha
Helix 25
25
B
913 932Right-handed alpha
Helix 26
26
B
933 939Right-handed 310
Helix 27
27
B
942 950Right-handed alpha
Helix 28
28
B
954 973Right-handed alpha
Helix 29
29
B
974 979Right-handed alpha
Helix 30
30
B
981 988Right-handed alpha
Helix 31
31
B
991 1006Right-handed alpha
Helix 32
32
B
1007 1009Right-handed 310
Helix 33
33
B
1013 1018Right-handed 310
Helix 34
34
B
1019 1027Right-handed alpha
Helix 35
35
B
1031 1057Right-handed alpha
Helix 36
36
B
1058 1061Right-handed 310
Helix 37
37
B
1062 1075Right-handed alpha
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There are no sheets in PDB entry 4QMI
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il